Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_68300 |
Symbol | arcD |
ID | 4384391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 6093086 |
End bp | 6094534 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639328107 |
Product | arginine/ornithine antiporter |
Protein accession | YP_793641 |
Protein GI | 116053317 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000378428 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.106229 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCAAG AATCCAGCCA AAAACTCCGA CTAGGAGCGC TAACGGCTCT GGTTGTCGGC TCGATGATCG GAGGGGGCAT CTTCTCCCTT CCGCAAAACA TGGCAGCCAG CGCCGACGTC GGCGCCGTCC TGATCGGATG GGCGATCACC GCCGTCGGCA TGCTCACCCT CGCTTTCGTC TTCCAGACCC TCGCCAACCG CAAGCCCGAA CTCGACGGCG GCGTGTACGC CTACGCCAAG GCCGGCTTCG GCGACTACAT GGGTTTCTCC TCGGCCTGGG GCTACTGGAT CAGCGCCTGG CTGGGCAACG TCGGCTACTT CGTCCTGTTG TTCAGCACCC TCGGCTACTT CTTCCCGATC TTCGGCAAGG GCGACACCGT CGCCGCGATC GTCTGCGCCT CGGTCCTGCT CTGGGCCCTG CATTTCCTGG TGCTGCGCGG GATCAAGGAG GCGGCGTTCA TCAACACCGT CACCACCGTG GCCAAGATCG TGCCGCTGTT CCTGTTCATC CTGATCTGCC TGTTCGCCTT CAAGCTGGAC ATCTTCACCG CCGACATCTG GGGCAAGAGC AACCCGGACC TGGGCAGCGT GATGAACCAG GTGCGCAACA TGATGCTGGT CACCGTCTGG GTGTTCATCG GCATCGAGGG CGCGAGCATC TTCTCCTCCC GCGCGGAAAA ACGTTCCGAC GTCGGCAAGG CCACCGTGAT CGGCTTCATC ACCGTCCTGC TCCTGCTGGT GCTGGTCAAC GTGCTGTCCA TGGGCGTGAT GACCCAGCCG GAACTGGCCA AGCTGCAGAA CCCGTCGATG GCGCTGGTAC TCGAGCATGT GGTCGGCCAC TGGGGCGCCG TGCTGATCAG CGTCGGCCTG CTGATCTCGC TGCTGGGCGC GCTGCTCTCC TGGGTGCTGC TGTGCGCCGA GATCATGTTC GCCGCGGCCA AGGACCACAC CATGCCGGAG TTCCTGCGCC GCGAGAACGC CAACCAGGTG CCGGCCAACG CCCTGTGGCT GACCAACATC TGCGTACAGG TGTTCCTGGT GGTGGTGTTC TTCACCTCGG GCGACCCGGA CGGCATGGAC CCGTACACCA AGATGCTGCT CCTGGCCACC TCGATGATCC TGATTCCGTA CTTCTGGTCC GCCGCCTATG GCCTGCTGTT GACCCTGAAG GGCGAGACCT ACGAGAACGA TGCCCGCGAA CGCAGCAAGG ACCTGGTCAT CGCCGGCATC GCTGTGGTCT ACGCGGTCTG GCTGCTCTAC GCCGGTGGCC TGAAGTACCT GCTGCTGTCC GCCCTGCTGT ATGCGCCCGG CGCGATCCTC TTCGCCAAGG CCAAGCACGA GGTCGGCCAG CCGATCTTCA CCGGAATCGA AAAACTGATC TTCGCCGCAG TCGTCATTGG CGCCCTGGTG GCTGCCTACG GCCTCTACGA CGGTTTCCTC ACCCTCTGA
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Protein sequence | MSQESSQKLR LGALTALVVG SMIGGGIFSL PQNMAASADV GAVLIGWAIT AVGMLTLAFV FQTLANRKPE LDGGVYAYAK AGFGDYMGFS SAWGYWISAW LGNVGYFVLL FSTLGYFFPI FGKGDTVAAI VCASVLLWAL HFLVLRGIKE AAFINTVTTV AKIVPLFLFI LICLFAFKLD IFTADIWGKS NPDLGSVMNQ VRNMMLVTVW VFIGIEGASI FSSRAEKRSD VGKATVIGFI TVLLLLVLVN VLSMGVMTQP ELAKLQNPSM ALVLEHVVGH WGAVLISVGL LISLLGALLS WVLLCAEIMF AAAKDHTMPE FLRRENANQV PANALWLTNI CVQVFLVVVF FTSGDPDGMD PYTKMLLLAT SMILIPYFWS AAYGLLLTLK GETYENDARE RSKDLVIAGI AVVYAVWLLY AGGLKYLLLS ALLYAPGAIL FAKAKHEVGQ PIFTGIEKLI FAAVVIGALV AAYGLYDGFL TL
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