Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_66320 |
Symbol | |
ID | 4385440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5912407 |
End bp | 5915106 |
Gene Length | 2700 bp |
Protein Length | 899 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639327950 |
Product | hypothetical protein |
Protein accession | YP_793486 |
Protein GI | 116053165 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGTC ATCCCGATGC CGCCAGCCGT TCGGCGGCCG AGGTTGTCAC GCAGCTACCC GTGCCGTCGC GGCTCGGGCT GCTGCGTTTC GAGCGGCTGA ACGAGCCGAG CTGGGCACTG CTGTTCCTCG ATCCTGCCTG CGAGCGCCAG CTCGGGCTGC CGGCGACTAC CCTCTGCGCA CTGCTCGATG CGCCTTACGC CAGCCTGATG GAACCCGAGG CCCGCCACCG CCTGCACGAG CAGATCCAGC AGCAACTGGT GAAGCGCCCG CACTACCAGG TGAGCTACAA GCTGCACACA CCCAACGGCG TGCTGACCAT GCTGGAGTTC GGCGAAGCCT TCCAGCAGCA TGGCCGCCAG TTGCTGCACG GCTACCTGAT GGTCGAGGAG CGACAGGAGA GCGCCGAGCG CAGCGAACAG TTGCTCGACC TGGAATCGCA GAACCTGCGC CTGAAGGCGT CCCTGGACCT CTACCAGCGC TCCCAGGACG ACCACCTGCA ACACCTGCTG CGCTCGCGCA CCCAGCAGAA CCTGATCGTC CGCCTGGCCC GCCATCGCTA CCTGTCCAGC GACCCGCTGC TGGAAGCCGC GCAACTGATC ACCCAGGCCG CCTGCGAAGC CTACGGCACC GCGCGCGCCG GCATCTGGCG CCTGCTCGAC GACCAGCGCC TGGAAGCGGT GACCGTCTAC CGCCGCGACC TCGACCAGTA CGAGAAGCCC CAGAGCATCG ACGCCAGCCG CTACCCCGCC TACCTCGAGG CGGTACACAG CGGGCGCGCC ATCGACGCCC ACAACGCCCA GCGCGACCCA CGCACCCAGG AACTCTACAA GGACTACCTG AAGCCGCTGG GCGTCAACGC CCTGCTCGAC GCCACCATCC GCATCGGCGG CGAGGTGGTC GGCGTGCTGT GCCTGGAACA CGCCGGCGAG AACCGCATGT GGCAGAGCGA CGAGATCGCC TTCGCCGGGG AACTCGCCGA CCAGTACGCG CAGGTCCTGA TGAACCACGA GCGACGCAAT GTCTCCAGCG CCCTGCACCT GTTCCAGCGC GCGGTGGAAC AGAGCGCCAG CGCCTTCCTG CTGATCGACC GCGACGGCGT GGTGGAATAC GTCAATCCGA GCTTCACCTC GATCACCCAG TACAGCGCCG ACGAAGTGCG TAACCGACGC CTGTCCGAGC TTCCGGCGCT GGAGAACCTC AGCGAGCTGC TGTTCGACGC GCGTTCCGCG CTGACCCAGC AGAACAGCTG GCAGGGCGAG TTCCGCAGCC GCCGCAAGAA CCACGAGCCT TACTGGGGCC AGTTGTCGCT GTCGAAGGTC TACGACGATC TCGGCGAGCT GACCCACTAC ATCGGCATCT ACGAAGACAT CACGCAGAAC AAGCTGGCCC AGCAGCACAT CGAGAAACTC GCCTACCGCG ACAACCTCAC CGGCCTGGCC AACCGGCACT ATTTCATCGG CGCCCTCGAG GAACGCCTGG AAAGCAGCGG CGACCGCCCG CTCAGCCTGC TGCTGGTGGA CATCGACAAC TTCAAGCGGA TCAATGACAG CCTCGGCCAC CAGACCGGCG ACAAGCTGCT GGTCAGCCTG GCCCGGCGCT TGCGCAGTTG CCTCGGCGAC AGCGCCACCC TGGCGCGCTT CGCCAGCAAC GAGTTCGCCG TGCTGCTCGA CGACACCGCG GTGGAAAAGG GCGAAAGCAT TGCCGCGCAG GTCCTGCACA TGCTCGACAA GCCGCTGTTC GTCGACAACC AGTTGATCAA CATCACCGGC TCCATCGGCC TGGCCAGCGC CCCGCAGCAC GGCTGCGACC CGCAGACCCT GATGAAGTAC GCCGGCCTGG CGCTGCACAA GGCCAAGGCC AACGGCAAGC ACCAGGTCCA GGTGTTCACC GAGGCGCTGA CCGCCGAGGC CAGCTACAAG CTGTTCGTCG AGAGCAACCT GCGCCGCGCC CTGGCGCAGA ACGAACTGGC GGTGCACTAC CAGCCCAAGC TGTGCCTGCG CAGCGGCCAG TTGCTCGGCC TGGAAGCCCT GCTGCGCTGG CAGCATCCGG AAAAAGGCAT GATCCGCCCG GACCGCTTCA TCAGCGTGGC CGAGGAAACC GGGCTGATCG TGCCGATCGG CAAGTGGGTG ATCCGCGAAG CCTGTCGCCA GGCCCGCGAG CTGGCCGAGG CCGGGCTGGG CGAGCTGCAG ATCGCCATCA ACCTGTCGCC CAAGCAGTTC ACCGACCCGG ACCTGGTCGG CTCGATCGCG GCGATCCTCC ACGAAGAGAA CATTCCGGCC AGCCAGCTGG AACTGGAGCT CACCGAAAGC CTGCTGCTGG ACGCCACCGA CGATACCCGC CAGCAACTCG AACGCCTGAA GAGCCTCGGC CTGACCCTGG CGATGGACGA CTTCGGCACC GGCTACTCGT CGCTGAGCTA CCTGAAGAAA TTCCCCATCG ACGTGATCAA GATCGACCGC AGCTTCATCA AGGACATCCC GGACAGCCAG GACGACATGG AAATCACCTC GGCGGTGATC GCCATGGCCC ACAACCTCAA GCTCAAGGTA GTCGCCGAAG GCGTGGAGAG CGCCGAGCAA CTGGCCTTCC TCCGGCGCAA CCGCTGCGAC ATCGGCCAGG GCTACCTGTT CGACCGGCCG ATCCCCAGCG ACCTGCTCAA TACCAGCCTG CTGCGCTATC CCTGCCGCAC CCTGCACTGA
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Protein sequence | MKSHPDAASR SAAEVVTQLP VPSRLGLLRF ERLNEPSWAL LFLDPACERQ LGLPATTLCA LLDAPYASLM EPEARHRLHE QIQQQLVKRP HYQVSYKLHT PNGVLTMLEF GEAFQQHGRQ LLHGYLMVEE RQESAERSEQ LLDLESQNLR LKASLDLYQR SQDDHLQHLL RSRTQQNLIV RLARHRYLSS DPLLEAAQLI TQAACEAYGT ARAGIWRLLD DQRLEAVTVY RRDLDQYEKP QSIDASRYPA YLEAVHSGRA IDAHNAQRDP RTQELYKDYL KPLGVNALLD ATIRIGGEVV GVLCLEHAGE NRMWQSDEIA FAGELADQYA QVLMNHERRN VSSALHLFQR AVEQSASAFL LIDRDGVVEY VNPSFTSITQ YSADEVRNRR LSELPALENL SELLFDARSA LTQQNSWQGE FRSRRKNHEP YWGQLSLSKV YDDLGELTHY IGIYEDITQN KLAQQHIEKL AYRDNLTGLA NRHYFIGALE ERLESSGDRP LSLLLVDIDN FKRINDSLGH QTGDKLLVSL ARRLRSCLGD SATLARFASN EFAVLLDDTA VEKGESIAAQ VLHMLDKPLF VDNQLINITG SIGLASAPQH GCDPQTLMKY AGLALHKAKA NGKHQVQVFT EALTAEASYK LFVESNLRRA LAQNELAVHY QPKLCLRSGQ LLGLEALLRW QHPEKGMIRP DRFISVAEET GLIVPIGKWV IREACRQARE LAEAGLGELQ IAINLSPKQF TDPDLVGSIA AILHEENIPA SQLELELTES LLLDATDDTR QQLERLKSLG LTLAMDDFGT GYSSLSYLKK FPIDVIKIDR SFIKDIPDSQ DDMEITSAVI AMAHNLKLKV VAEGVESAEQ LAFLRRNRCD IGQGYLFDRP IPSDLLNTSL LRYPCRTLH
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