Gene PA14_66040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_66040 
Symbol 
ID4382258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5880991 
End bp5882199 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content66% 
IMG OID639327927 
Productputative acyl-CoA dehydrogenase 
Protein accessionYP_793463 
Protein GI116053142 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCTGG AAACCCCGAA GAAATTCCGC AGCCTGGCTA ACCAGGCGCA TCAGGTCGCG 
GAAAACTATT TCCGGCCGAT CTCGCGCAAG TACGACAAGG CCGAACACGC CTATCCGAAG
GAGCTGGACC TGCTCGCGGC CTTGCTGGAC GGCATGAACA GCGGCTCGCC CGAGGCTGTC
GGCGCGACCT CGGCGAGCAA GCGCGCCGGC AAGCAGGTAG AGGAGGGCAT CAAGAACGGC
GGCAACCTGT CGGCATTGCT CGGCGTGATG GAACTGTGCT GGGGCGACGT CGGCCTGCTC
CTGGCCATGC CGCGCCAGGG GCTGGGCAAC GCGGCGATCG CCGCGGTGGC CAACGAGGAG
CAGTTGCAGC GCTTCGGCGG CACCTGGGCG GCGATGGCGA TCACCGAGCC GGGCTGCGGC
TCGGACTCGG CGGCGATTCG CACCACCGCG ACCCAGGATG GCGACCACTA TGTACTGAAC
GGCGAGAAGA TTTTCGTCAC TTCCGGCGAG CGGGCCGATG CCGTGGTGGT CTGGGCCACC
CTGAACCGCA ACCTGGGGCG GGCGGCGATC AAGTCCTTCG TGGTCGAGAA GGGCACGCCG
GGGATGACCG TGACGCGCCT GGAGAAGAAG CTCGGGATCA AGGCTTCGGA TACCGCTTCG
ATCAGTTTCA ATGATTGCCG GGTGCCGGCC GCGAACCTGC TGGGCAACGC CGAGGTCGAC
GTGCAGAAGG GTTTCGCCGG GGTCATGGAG ACCTTCGACA ATACCCGCCC GCTGGTGGCC
GGCATGGCCG TCGGGGTGGC CAAGGCGGCG CTGGACCGGA CCCGCGAATT GCTGAAGAAG
GCTGGCTGCA AGTTCGACTA CAGGAAACCG CTGCTCACCG TCAGCCACGC CGAGGCCACT
CTCTATCGCC TGGAGGCGGA GTGGGAGGCA GCGCGCCTGT TGACCTTGAA GGCGGCATGG
ATGGCCGACA ACAAGCTGCC CAACTCGAAG GAAGCGTCCA TCGCCAAGGC CAAGGCTGGA
CGGGTGGCCA ACGAGATCAC CCTGAAGTGC GTGGAGCTGG CTGGCGCCCT CGGCTACGCC
GAGGATGAGC TGTTGGAGAA GTGGGCGCGG GACTCGAAGA TCCTCGACAT CTTCGAGGGC
ACCCAGCAGA TCCAGCTGCT CATCGTCGCT CGCCGCCTGC TCGGCAAGTC TTCCAGCCAG
TTGAAGTAG
 
Protein sequence
MYLETPKKFR SLANQAHQVA ENYFRPISRK YDKAEHAYPK ELDLLAALLD GMNSGSPEAV 
GATSASKRAG KQVEEGIKNG GNLSALLGVM ELCWGDVGLL LAMPRQGLGN AAIAAVANEE
QLQRFGGTWA AMAITEPGCG SDSAAIRTTA TQDGDHYVLN GEKIFVTSGE RADAVVVWAT
LNRNLGRAAI KSFVVEKGTP GMTVTRLEKK LGIKASDTAS ISFNDCRVPA ANLLGNAEVD
VQKGFAGVME TFDNTRPLVA GMAVGVAKAA LDRTRELLKK AGCKFDYRKP LLTVSHAEAT
LYRLEAEWEA ARLLTLKAAW MADNKLPNSK EASIAKAKAG RVANEITLKC VELAGALGYA
EDELLEKWAR DSKILDIFEG TQQIQLLIVA RRLLGKSSSQ LK