| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_65820 |
|---|
| Symbol | |
|---|
| ID | 4382242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 5862849 |
|---|
| End bp | 5864009 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639327911 |
|---|
| Product | putative acyl-CoA dehydrogenase |
|---|
| Protein accession | YP_793447 |
|---|
| Protein GI | 116053126 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 86 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTCA GGCTGACCCA GGAACAGGAC ATGCTGGTCG AGGCGGTGCG CAGCTTCGTC
GAGAAGGAAC TGCTGCCCCA CGAGGACGAT GTCGACCGCG CCGACGCGGT GTCGCCGGAG
CTGGCCGCAC AGATTCGCGG CAAGGCCCTC GCGGCCGGTT TCTATGCCTT CAACATGCCC
GAGGAAGTGG GCGGCGGCGG CCTCGACTAC CTGTCCCAGG CGCTGGTCGA ACGCGAGCTG
TCGAAGGTCT CCTGGGCCCT CCACGTATTC GTCGCGCGGC CCTCGAAGAT CCTCATGGCC
TGCACCGGAG AACAGCTCGG CGACTACCTG TTGCCCTGCG TGCAGGGCGA AAAGACCGAT
TGCTTCGCCC TCACCGAGCC GGGTGCCGGC TCCGACGCCA ATTCGATCAA GACCCGCGCG
GTGCGCGACG GCGACGCCTT CGTGATCAAC GGCAGCAAGC ACTTCATCAG CCACGCCGGG
CACGCCGACT TCGCCATCGT CTTCGCCGTC ACCGACAGCT ACGAGCACAA CGGCCGCAAG
CGCAACGCGG TGACCGCCTT CCTGGTGGAC AAGGGCACGC CCGGGATGAC CGTGCGCCGC
GGGCCGAAAT GCGTGAGCAA CCGTGGCTAC CACACTTACG AGATCTTCTT CGACGATTGC
CGGGTGCCGG CCTCCAAGGT ACTCGGCGAG GTCGGCAAGG GCTGGGAAGT GGCCAACGCC
TGGCTCACCG CCGGACGGGT GATGGTCGCC GCCAACTGCG TCGGCCAGGC CCAGCGCGCC
CTCGACCTAT CACTGCGCTG GGCGGCCGAT CGCAAGCAGT TCGGCCAGCC GATCGGCAGC
TACCAGGGCG TTTCCTTCAA GCTCGCCGAC ATGGCCACGC AGATCCGCGC CGCCGAGCTG
ATGACCCTGC ACACCGCCTG GAAGATGGAC CAGGGCACCA TGACCGACGG CGAGGCCGGC
ATGGCCAAGC TGTTCGCCAG CGAGACCCTC GGCAAGGTCG CCGACGAAGC GGTGCAGATC
TTCGGCGGCA TGGGCCTGAT GGATGAAGGA CCGGTCGAGC GCATCTGGCG CAACGCGCGG
ATCGAGCGGA TCTGGGAGGG CACTTCGGAA ATCCAGCGGC ACATCGTTTC CCGCGAACTG
CTGCGGCCGT TGCTGCGTTG A
|
|---|
| Protein sequence | MDFRLTQEQD MLVEAVRSFV EKELLPHEDD VDRADAVSPE LAAQIRGKAL AAGFYAFNMP
EEVGGGGLDY LSQALVEREL SKVSWALHVF VARPSKILMA CTGEQLGDYL LPCVQGEKTD
CFALTEPGAG SDANSIKTRA VRDGDAFVIN GSKHFISHAG HADFAIVFAV TDSYEHNGRK
RNAVTAFLVD KGTPGMTVRR GPKCVSNRGY HTYEIFFDDC RVPASKVLGE VGKGWEVANA
WLTAGRVMVA ANCVGQAQRA LDLSLRWAAD RKQFGQPIGS YQGVSFKLAD MATQIRAAEL
MTLHTAWKMD QGTMTDGEAG MAKLFASETL GKVADEAVQI FGGMGLMDEG PVERIWRNAR
IERIWEGTSE IQRHIVSREL LRPLLR
|
|---|
| |