Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_65630 |
Symbol | |
ID | 4384809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 5845884 |
End bp | 5846408 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639327897 |
Product | hypothetical protein |
Protein accession | YP_793433 |
Protein GI | 116053113 |
COG category | [R] General function prediction only |
COG ID | [COG3577] Predicted aspartyl protease |
TIGRFAM ID | [TIGR02281] clan AA aspartic protease, TIGR02281 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.411322 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 87 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGCAAC AGGCGCCCGG TCAGCGGCTG GGACGGATCA TGCTGGTGCT GGCCTGGATC GCCGGGCTGG CGCTGGCGAC GCGCTATTTC GGCGTCTGGG AAGATCGACA GCGCAACCCG AACCAGGCGC CGCAATCGAT CCATGGCGAC GGCTACGTCG AGTTGCGCCT GGCCAGCAGC CGCCAGGGCC ATTACCTGCT GAACGGGCAG ATCAACGGCC AGGGCGTGAC CTTCCTGCTC GATACCGGGG CGACCCAGGT GGCGGTGCCG GAAGCCCTGG CGGCAAGACT CGCGCTGGAG CGCGGCGCGC CGATCACCCT GAGCACGGCC AACGGCCGCG CCACGGGCTG GCGCACGCGG CTGGACCAGC TGCAACTCGG CGATATCCGC CTGTCCGGGG TCGCGGCGCT GATTGCGCCG GGCATGGACG GCGATGAGGT GCTACTCGGC ATGAGCGCCC TGAAACAACT CGAATTCACC CAGCGCGACG GCACCCTGGT GCTGCGCCAA AACACTTCTC CGTGA
|
Protein sequence | MTQQAPGQRL GRIMLVLAWI AGLALATRYF GVWEDRQRNP NQAPQSIHGD GYVELRLASS RQGHYLLNGQ INGQGVTFLL DTGATQVAVP EALAARLALE RGAPITLSTA NGRATGWRTR LDQLQLGDIR LSGVAALIAP GMDGDEVLLG MSALKQLEFT QRDGTLVLRQ NTSP
|
| |