Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_65500 |
Symbol | psd |
ID | 4384802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5833808 |
End bp | 5834677 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639327889 |
Product | phosphatidylserine decarboxylase |
Protein accession | YP_793425 |
Protein GI | 116053106 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0688] Phosphatidylserine decarboxylase |
TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 87 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTTCA AAGATCGTCT GTTCATCTGC AGCCAGTACC TGCTGCCGCA CCACCTGCTG TCCCGGCTGA TCGGCTTCGC CGCCGACTGC CGGGCGACCT GGTTCAAGGA CCGCCTGATC GCCTGGTTCG CCCGGCGCTA CCAGGTCGAC ATGCGCGAAG CACAGGTCGA GGACCTGCAG GCCTATGAAC ATTTCAATGC CTTCTTCACC CGCGCCCTGA AGGATGGCGC CCGCCCGCTG GCCCAGGAGC CCGGCGCGGT GCTCTGCCCG GCCGATGGCG CGATCAGCCA GCTCGGCCCG ATCGAGCACG GGCGGATCTT CCAGGCCAAA GGCCACAGCT ACAGCCTGGC CGAACTGCTC GGCGGCGACG CCGAACTGGC CGCGCCCTTC ATGGGCGGCG ACTTCGCCAC CGTCTACCTG TCCCCCCGGG ACTACCACCG CGTGCACATG CCGCTGGCCG GCACCCTGCG CGAGATGGTC TACGTTCCCG GCCGGCTGTT CTCGGTGAAC CAGACCACCG CGGAAAACGT TCCCGAGCTG TTCGCCCGCA ACGAGCGGGT GGTCTGCCTG TTCGACACCG AGCGCGGTCC GATGGCCGTG GTGCTGGTGG GCGCGATGAT CGTGGCCTCC ATCGAAACCG TCTGGGCCGG CCTGGTTACG CCGCCGAAGC GCGAACTGAA GACCTTCCGC TACGACGAAG CCGCCCGCGC GCCGATCCGC CTGGAAAAAG GCGCCGAGCT GGGTCGCTTC AAGCTGGGCT CCACCGCCAT CGTCCTGTTC GGCCCGCAGC AGGTCGCGTT CAACGACGGC CTCGGGGCAG CGAGCCCGGT GCGCATGGGC GAGTGCCTGG CCCTGCCGAA ACAGGCCTGA
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Protein sequence | MSFKDRLFIC SQYLLPHHLL SRLIGFAADC RATWFKDRLI AWFARRYQVD MREAQVEDLQ AYEHFNAFFT RALKDGARPL AQEPGAVLCP ADGAISQLGP IEHGRIFQAK GHSYSLAELL GGDAELAAPF MGGDFATVYL SPRDYHRVHM PLAGTLREMV YVPGRLFSVN QTTAENVPEL FARNERVVCL FDTERGPMAV VLVGAMIVAS IETVWAGLVT PPKRELKTFR YDEAARAPIR LEKGAELGRF KLGSTAIVLF GPQQVAFNDG LGAASPVRMG ECLALPKQA
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