Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_65410 |
Symbol | orn |
ID | 4384854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 5827671 |
End bp | 5828213 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639327883 |
Product | oligoribonuclease |
Protein accession | YP_793419 |
Protein GI | 116053100 |
COG category | [A] RNA processing and modification |
COG ID | [COG1949] Oligoribonuclease (3'->5' exoribonuclease) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.134577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 83 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAACC CGCAGAACCT TATCTGGATC GACCTGGAGA TGACCGGCCT CGATCCGGAC CGGGACGTCA TCATCGAGAT GGCCACCATC GTCACCGACA GTGACCTCAA CACCCTGGCC GAAGGACCGG TGATCGCCAT CCACCAGCCA GAGGAAATCC TCGCCGGCAT GGACGAGTGG AATACCCGCC AGCACGGCCA GTCCGGCCTG ACCCAGAGGG TTCGGGAAAG TACCGTGAGC ATGGCCGAGG CCGAGGCGCA GACCCTGGCC TTCCTCGAGC AGTGGGTGCC CAAGCGCAGC TCGCCGATCT GCGGCAACAG CATCTGCCAG GACCGCCGCT TCCTCTATAG GCACATGCCC AGGCTGGAAG GCTACTTCCA CTACCGCAAC CTCGACGTCT CCACCCTCAA GGAGCTGGCT GCGCGCTGGG CGCCGCAGGT CCGCGAGAGC TTCAAGAAGG GTAACACCCA CCTGGCGCTG GACGATATCC GCGAGTCGAT CGCCGAGCTG CGCCACTATC GCGACCACTT CATCAAGCTC TGA
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Protein sequence | MQNPQNLIWI DLEMTGLDPD RDVIIEMATI VTDSDLNTLA EGPVIAIHQP EEILAGMDEW NTRQHGQSGL TQRVRESTVS MAEAEAQTLA FLEQWVPKRS SPICGNSICQ DRRFLYRHMP RLEGYFHYRN LDVSTLKELA ARWAPQVRES FKKGNTHLAL DDIRESIAEL RHYRDHFIKL
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