Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_65040 |
Symbol | |
ID | 4380848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 5795237 |
End bp | 5796088 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639327855 |
Product | hypothetical protein |
Protein accession | YP_793393 |
Protein GI | 116053074 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0222155 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATGACA CGACGATCGT CAACGTAGGT ACCGAGAAGA TCAACGCGCT CTGGGCGACG GTGTCCCAGT ACGCCTTCGC CTTCGGCATC AAGATTCTCG CGGCCATCGC CTTCTGGATG ATCGGCCGCT GGCTGATCGG CTTCGCCGTC GGCATGGTGC AGAAATCCCT CGAGCGGCAA AAGGTCGATC CCACCGTGCT GCGCTACGTG GGTTCGTTCA TCACGGTGAC CCTGAACGTG CTGCTGGTGG TGGGCATCCT CGGTTTCTTC GGCATCCAGA CCACCAGCCT GGCGGCGCTG ATCGCGGCGG TCGGCCTGGC CATCGGCATG GCCTGGTCGG GATTGCTGGC GAACCTGGCG GCCGGCGGTT TCATCATCGT CCTGCGGCCG TTCAAGGTCG GCGACTTCAT CTGCGCCGGC GGAGTGGCCG GCACGGTGAA GGAGATCGGC CTGTTCACCA CGGCGATCAA CACTCCGGAC AACGTGCTGA CCATGGTCGG CAACAACAAG ATATTCGGCG ACAACATCCA GAACTTCACC CACAACCCGT TCCGCCGGGT CGAGTTGAAG GCGCAGCTTT CCGGTGCCGC CGACTACCAG GCGGCCATCG CCCTGCTCAA GCAGCGTGTC GCGGCGATTC CCAACGTGCT CGGCGAGCCG CCGGTGGACG TGGAGATCCT CGAGTTCAAC CTGGTCGGGC CGGTGCTGGC GGTGCGCCCG TATTGCCACA ACGACCATTA CTGGCAGGTC TATTTCGATA CCAACAAGGT GATCAAGGAC GCCCTCGGCG CCGACTTCCC GGCACCGATG CCGGCGCAGA CGGTGATCGT GCAGCAGTCC GCCGGTGCCT GA
|
Protein sequence | MDDTTIVNVG TEKINALWAT VSQYAFAFGI KILAAIAFWM IGRWLIGFAV GMVQKSLERQ KVDPTVLRYV GSFITVTLNV LLVVGILGFF GIQTTSLAAL IAAVGLAIGM AWSGLLANLA AGGFIIVLRP FKVGDFICAG GVAGTVKEIG LFTTAINTPD NVLTMVGNNK IFGDNIQNFT HNPFRRVELK AQLSGAADYQ AAIALLKQRV AAIPNVLGEP PVDVEILEFN LVGPVLAVRP YCHNDHYWQV YFDTNKVIKD ALGADFPAPM PAQTVIVQQS AGA
|
| |