Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_64900 |
Symbol | |
ID | 4384836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 5783356 |
End bp | 5784480 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639327843 |
Product | putative binding protein component of ABC transporter |
Protein accession | YP_793381 |
Protein GI | 116053062 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAGA AGCTGTTCAG AAAAGGCATC CTGGCTCTCG CGGTTTCGTC CGTGATGGGT CTTTCCACGC ATGCGCTGGC CGACGTCGTG ATCGGCGTGG CCGGACCGCA TACCGGCGCC AACGCCTCCT TCGGCGAGCA ATACTGGCGC GGCGCGTCCC AGGCGGCGGA AGACATCAAC GCGGCGGGTG GGATCAACGG CGAGAAGATC AAGCTGGTCA AGGCCGACGA CGCCTGCGAA CCGAAGCAGG CCGTGGCCGT GGCCAACCGC CTGGTGGACC AGGACAAGGC CATCGCCGTG GTCGGCCATT TCTGCTCTTC TTCGACCATC CCCGCATCCG AGGTCTACGA CGAGGCCGGG ATCATCGCCA TCACCCCCGG TTCCACCAAC CCGCAGGTCA CCGAGCGCGG ACTCTCCGGG ATGTTTCGCA TGTGCGGCCG CGACGACCAG CAGGGCGTGG TCGCCGGCGA CTATATCGTC AAGGTGCTGA AGGCCAAGAA GGTCGCGGTG ATCCACGACA AGGACACCTA TGGCCAGGGC CTGGCGGACG CCACCAGGGC GCAACTGAAC AAGCTCGGCG TGAAAGAGGT TCTCTACGAG GGCCTGACCC GCGGCGAGAA GGACTTCAAC GCGCTGGTTA CCAAGATCCG CGCCTCCGGT GCCGAGGTCG TCTACTTCGG CGGCCTGCAT CCGGAAGCCG GTCCGCTGGT ACGGCAGATG CGTGAACAGG GACTGACCGC CAAGTTCATG TCCGACGACG GCGTGGTCAC CGACGAACTG GCGACCACCG CCGGCGGTCC GCAGTACGTC AAGGGCGTGC TGATGACCTT CGGCGCCGAC CCGCGGCTGA TCCCCGACGG CAAGGCGGTG GTGGAGAAGT TCCGTGCCGG CGGTTTCGAG CCGGAAGGCT ACACCCTCTA CTCCTACGCC TCGATCCAGT CCCTGGCGGC GGCCTTCAAC GGCGCCGGCG CCAACGATCC GGCCAAGGCC GCCGAGTGGC TGAAGTCGAA TCCGGTGCAG ACCGTGATGG GCAAGAAGGA ATGGGACAAG AAGGGCGACC TGAAAGTCTC CGACTACGTG GTCTACGAGT GGGACGACAA GGGCAAGTAC CACCAGTTGC CCTGA
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Protein sequence | MSKKLFRKGI LALAVSSVMG LSTHALADVV IGVAGPHTGA NASFGEQYWR GASQAAEDIN AAGGINGEKI KLVKADDACE PKQAVAVANR LVDQDKAIAV VGHFCSSSTI PASEVYDEAG IIAITPGSTN PQVTERGLSG MFRMCGRDDQ QGVVAGDYIV KVLKAKKVAV IHDKDTYGQG LADATRAQLN KLGVKEVLYE GLTRGEKDFN ALVTKIRASG AEVVYFGGLH PEAGPLVRQM REQGLTAKFM SDDGVVTDEL ATTAGGPQYV KGVLMTFGAD PRLIPDGKAV VEKFRAGGFE PEGYTLYSYA SIQSLAAAFN GAGANDPAKA AEWLKSNPVQ TVMGKKEWDK KGDLKVSDYV VYEWDDKGKY HQLP
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