| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_64700 |
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| Symbol | |
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| ID | 4384877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 5762050 |
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| End bp | 5762586 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639327826 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_793364 |
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| Protein GI | 116053045 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.00208026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCGC CAAGCCCCTG CCTGCAAGCG GACCGCGACT GCGTCGCCAC GCTCTACCGT
GAAAACCATG CCTGGTTGCG CAACTGGCTG GCCTACCGCC TTCGCTCCTG GGGACGTGGC
GTGGCCGACG ACCTGGCCCA CGACACTTTC CTGCGCATCC TCGCCAGCCG CGATGGCGGC
CAGCGTGACG CGATCCGTCA GCCGCGCGCC TACCTCACCC GCATCGCCAA CTGCGTGCTG
GTCAGCTGGC GCCGTCGCCA ATCGCTGGAA CTCGCCTGGC TGGAGGCCCT GGCCACGTTG
CCCGAGCCGT TGCAGCCGTC GCCGGAACAA CAGAGTGTGA TCGTCGAGAC CCTGCACGAG
ATCGACGCGC TGCTCGACAC CCTGCGACCG CGGGTGAAAC AGGCATTCCT GATGGCGACG
CTGGACGGCA TGAAGCAGAA GGACATCGCC CAGGCGCTGG GCGTCGCGCT GCCGACGGTG
AAGAAGTTCA TCCACCAGGC CTACGTGACC TGCCTGAGCC TGATGCCCGA TGAATGA
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| Protein sequence | MNAPSPCLQA DRDCVATLYR ENHAWLRNWL AYRLRSWGRG VADDLAHDTF LRILASRDGG
QRDAIRQPRA YLTRIANCVL VSWRRRQSLE LAWLEALATL PEPLQPSPEQ QSVIVETLHE
IDALLDTLRP RVKQAFLMAT LDGMKQKDIA QALGVALPTV KKFIHQAYVT CLSLMPDE
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