| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_63480 |
|---|
| Symbol | |
|---|
| ID | 4383273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 5659342 |
|---|
| End bp | 5660739 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639327731 |
|---|
| Product | putative amino acid permease |
|---|
| Protein accession | YP_793269 |
|---|
| Protein GI | 116052952 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.059439 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.982931 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGACA ACAAGAACAA GGTCCTGCGG TTGCGCGATG TGGTGCTCTA CACGGTCTCG
GCGATGCTCT TCATGGACCA GATCGCCCTG GCTTCCTCCC TCGGTCCGTC GAGCCTGTTC
TGGTGGCTCT ACGTTCTGCT CCTGCTGTTC CTGCCGATGG CCATGATGAC CTCCGAGCTG
GGCACCGCCT TCCCCGCCAA CGGCGGCGTC TACCACTGGG TGCGTAGCGC CTTCGGCTTC
CGCTGGGGGG CCCGGGTGTC ATGGATGTAC TGGGTCAACA ACGCACTGTG GATGCCTTCG
GTCTACACCT TGTTCGGCAG CATGCTCGGC GCCTTCTATT TCCCCGAGCT GAGCCTCTGG
GGCAAGATCG CCATCGGCAT CGCCCTGGCG CTGCTCACCG CGGCGTTCAA CGTGGTCGCG
CTGCGCCTGG GCAAGTGGCT GCCGAACCTC GGCGCGCTGC TCAAGCTGCT CGCGGTGCTC
GCCCTGGGCG TCGGCGGCCT GCACTACGGC TGGAACCATG GCTTCGCCAA CGACTTCAGC
CTGGACTCCA TCGTCCCGTC CTCGCCGGGC CAGATGGCCG CGCTGGGAGT GATGGTCTAC
GGCATCATGG GGACCGAGCT GGCCTGTTGC AGCGCCGCGG AGATGCGCAA CGCGCGCCGC
GATATCCCGC GCGCGGTGCT GATCTCCGGG CTGATCGTCG GCGCCTTCAA CATCTTCGGC
ACCCTCGGCG TGCTGGCCGC GGTACCGGCC GAGGATACCG ACGTCACCCG GATCTTCGCC
CACACCCTCT ACAACATCTA CGGCCACGAC GGCGCCGGCG GGATGCTCGC CGACCTGGTC
GGCGCCTTCG TCCTGTTCAC CCTCTTCACC AACATGGTCA CCTGGAGCAT GGGCACCAAC
CGTGCCGCGG TGGAAGCGGC CAAGGCCGGC GAGCTGCCGG CGCTGTTCGG CGTGGTCCAT
TCGCGCCACG GCACGCCGAT CGGCTCGGCG GTGTTGGCCT CGGCGGTGAG CATCGTCCTG
CTGCTGCTCT ACGGCCTGGT GGCGCACACT GCCGAGGAAC TGTTCTGGAC CCTGCTGTCG
ATCTTCGCCA TGGTTTTCAT GATGCCCTAC GTGCTGATGT GCCTGGCCTT CGTCCGCCTG
CGCCGCGCTG ACCCGCGTCC ACGGCCCTAC CGGATGCCGC TGGGCGACCG CCTGGCCAGT
CTCTGGGCGC TGTTCGTCGC GCTGCATGTG CTGGCCGGCA TCGGCCTGTT CGTCGTCACC
CCAGGCGCGC CGATGGACTG GGCCTACGCC GGCAAGATCG TCGGCGGCGT GGCGCTGGCC
CTGGCCGTGG GCGAACTGCT GATCCGCCAG GCGGCGCGAA GGCGCGGCGT GATGTCGCTG
CGCGGTGCCT ACGGTTGA
|
|---|
| Protein sequence | MDDNKNKVLR LRDVVLYTVS AMLFMDQIAL ASSLGPSSLF WWLYVLLLLF LPMAMMTSEL
GTAFPANGGV YHWVRSAFGF RWGARVSWMY WVNNALWMPS VYTLFGSMLG AFYFPELSLW
GKIAIGIALA LLTAAFNVVA LRLGKWLPNL GALLKLLAVL ALGVGGLHYG WNHGFANDFS
LDSIVPSSPG QMAALGVMVY GIMGTELACC SAAEMRNARR DIPRAVLISG LIVGAFNIFG
TLGVLAAVPA EDTDVTRIFA HTLYNIYGHD GAGGMLADLV GAFVLFTLFT NMVTWSMGTN
RAAVEAAKAG ELPALFGVVH SRHGTPIGSA VLASAVSIVL LLLYGLVAHT AEELFWTLLS
IFAMVFMMPY VLMCLAFVRL RRADPRPRPY RMPLGDRLAS LWALFVALHV LAGIGLFVVT
PGAPMDWAYA GKIVGGVALA LAVGELLIRQ AARRRGVMSL RGAYG
|
|---|
| |