Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_62450 |
Symbol | trmA |
ID | 4385044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5571120 |
End bp | 5572211 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639327642 |
Product | tRNA (uracil-5-)-methyltransferase |
Protein accession | YP_793183 |
Protein GI | 116052866 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
TIGRFAM ID | [TIGR02143] tRNA (uracil-5-)-methyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCGTC CACAGTTCGA CCCCAGCGCC TACGCCGCGC AACTGGAAGA CAAGAAGTCC CGCCTCGCCG GATTGCTGGC CCCGTTCGCG GCACCCGCGC CGGAGATCTT CGAGTCGCCG CGCGAGCATT ACCGGCTGCG CGCCGAATTC CGCTTGTGGC GGGAAACCGG CAACGAGAAG CGTCACTACG CGATGTTCGA GCAGGGCGAC AAGCACACGC CGATCCTGAT CGAGGATTTC CCCATCGCCA GCCGCCGCAT CAACGAACTG ATGCCGCGCC TGAAGGCGGC CTGGGCCGAC CCGGCGCTGG GCTTCAAGCT GTTCCAGGTG GAGTTTCTCA CCACCCTGGC CGGCGACGCG CTGATCACCC TCTGCTACCA CCGGCCGATC GACGACGCCT GGCGACAGGC AGCGGAAAAG CTCGCGGCGG AACTGGGCGT GAACCTGGTC GGACGTTCGC GCGGCAAGCG TATCGTCGTC GGACGCGACT ATGTGGAGGA GGAACTGTCG GTCGCCGGCC GGCGCTTCCG CTACCGCCAG CCCGAGGGGG CTTTCACCCA GCCCAACGGC GAGGTCAACC AGAAGATGCT CGGCTGGGCC TACGAGGCGC TCGGCCAGCG CGACGACGAC CTGCTCGAAC TGTACTGCGG CAACGGCAAC TTCACCCTGC CCCTGGCCAC CCGGGTACGC AAGGTGCTGG CCACCGAGAT CAGCAAGTCC TCGGTCAATG CGGCGCTGGC CAACCTGGCC GACAACGCGG TGGACAACGT CAGCCTGGTG CGCCTGTCGG CCGAAGAGCT GACCCAGGCG CTGAACGAGG TTCGCCCGTT CCGCCGCCTG GCCGACATCG ATCTGAAGAG CTACGCCTTC GGCAATGTCT TCGTCGATCC GCCACGAGCC GGCATGGATC CGGACACCTG CGAGCTGACC CGGCGCTTCG AGCGCATCCT GTACATTTCG TGCAACCCGG AAACCCTGGC GCAGAACATC GCCCAACTGC ACGACACGCA CCGGATCAGC CGCTGCGCGC TGTTCGACCA GTTCCCCTAC ACCCACCACA TGGAAAGCGG CGTCCTGCTC GAACGCCGCT GA
|
Protein sequence | MSRPQFDPSA YAAQLEDKKS RLAGLLAPFA APAPEIFESP REHYRLRAEF RLWRETGNEK RHYAMFEQGD KHTPILIEDF PIASRRINEL MPRLKAAWAD PALGFKLFQV EFLTTLAGDA LITLCYHRPI DDAWRQAAEK LAAELGVNLV GRSRGKRIVV GRDYVEEELS VAGRRFRYRQ PEGAFTQPNG EVNQKMLGWA YEALGQRDDD LLELYCGNGN FTLPLATRVR KVLATEISKS SVNAALANLA DNAVDNVSLV RLSAEELTQA LNEVRPFRRL ADIDLKSYAF GNVFVDPPRA GMDPDTCELT RRFERILYIS CNPETLAQNI AQLHDTHRIS RCALFDQFPY THHMESGVLL ERR
|
| |