Gene PA14_62000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_62000 
SymbolhitA 
ID4384625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5529629 
End bp5530636 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content65% 
IMG OID639327603 
Productferric iron-binding periplasmic protein HitA 
Protein accessionYP_793149 
Protein GI116052832 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.617589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.0992069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTTC GACTTCTCAA CCGTTTCCGC CACGCCGCCC TGGCGTGCCT GCTCGGTTCG 
CTTTCCCTCA ATGCGGCGGC CGATCCCGTC ACCCTTACCC TCTACAATGG CCAGCACGCC
GCCACCGGTA TCGCCATCGC CAAGGCCTTC CAGGACAAGA CCGGCATCCA GGTGAAGATC
CGCAAGGGCG GCGATGGCCA GCTCGCCAGC CAGATCACCG AGGAAGGCGC GCGCTCGCCG
GCCGACGTGC TCTACACCGA GGAATCGCCA CCGTTGATCC GCCTGGCCAG CGCCGGCCTG
CTGGCCAAGC TGGAGCCAGA GACCCTGGCC CTGGTCGAGC CGGAGCACGC CGGCGGCAAC
GGCGACTGGA TCGGCATCAC CGCCCGCACC CGGGTACTGG CCTACAACCC GAAGAAGATC
GACGAGAAGG ATCTGCCGAA GAGCCTGATG GATCTTTCCG ATCCGTCCTG GTCCGGCCGT
TTCGGCTTCG TGCCCACCAG TGGCGCCTTC CTCGAACAGG TCGCCGCAGT GATCAAGCTC
AAGGGCCAGG AGGAAGCCGA GGATTGGCTG ACCGGCCTGA AGGCCTTCGG CTCGATCTAC
ACCAACAACG TCACCGCCAT GAAAGCCGTG GAGAACGGCG AGGTCGACAT GGCGCTGATC
AACAACTACT ACTGGTACAC CCTGAAAAAG GAAAAGGGCG AGTTGAACTC GCGCCTGCAC
TACTTCGGCA ACCAGGACCC GGGCGCGCTG GTCACCGTCT CCGGCGCCGC AGTGCTCAAG
TCCAGCAAGC ACCCCAGGGA AGCCCAGCAG TTCGTCGCCT TCATGCTCAG CGAGGAAGGC
CAGAAGGCGA TCCTCAGCCA GTCCGCCGAG TACCCGATGC GCAAGGGGAT GCAGGCCGAT
CCGGCGCTGA AGCCGTTCGC CGAACTGGAC CCACCGAAAC TGACCCCGGC CGACCTGGGT
GAGGCCAGCG AGGCCCTCAG CCTCGAACGC GACGTTGGCC TGAATTGA
 
Protein sequence
MPVRLLNRFR HAALACLLGS LSLNAAADPV TLTLYNGQHA ATGIAIAKAF QDKTGIQVKI 
RKGGDGQLAS QITEEGARSP ADVLYTEESP PLIRLASAGL LAKLEPETLA LVEPEHAGGN
GDWIGITART RVLAYNPKKI DEKDLPKSLM DLSDPSWSGR FGFVPTSGAF LEQVAAVIKL
KGQEEAEDWL TGLKAFGSIY TNNVTAMKAV ENGEVDMALI NNYYWYTLKK EKGELNSRLH
YFGNQDPGAL VTVSGAAVLK SSKHPREAQQ FVAFMLSEEG QKAILSQSAE YPMRKGMQAD
PALKPFAELD PPKLTPADLG EASEALSLER DVGLN