Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_62000 |
Symbol | hitA |
ID | 4384625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5529629 |
End bp | 5530636 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639327603 |
Product | ferric iron-binding periplasmic protein HitA |
Protein accession | YP_793149 |
Protein GI | 116052832 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.617589 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.0992069 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGTTC GACTTCTCAA CCGTTTCCGC CACGCCGCCC TGGCGTGCCT GCTCGGTTCG CTTTCCCTCA ATGCGGCGGC CGATCCCGTC ACCCTTACCC TCTACAATGG CCAGCACGCC GCCACCGGTA TCGCCATCGC CAAGGCCTTC CAGGACAAGA CCGGCATCCA GGTGAAGATC CGCAAGGGCG GCGATGGCCA GCTCGCCAGC CAGATCACCG AGGAAGGCGC GCGCTCGCCG GCCGACGTGC TCTACACCGA GGAATCGCCA CCGTTGATCC GCCTGGCCAG CGCCGGCCTG CTGGCCAAGC TGGAGCCAGA GACCCTGGCC CTGGTCGAGC CGGAGCACGC CGGCGGCAAC GGCGACTGGA TCGGCATCAC CGCCCGCACC CGGGTACTGG CCTACAACCC GAAGAAGATC GACGAGAAGG ATCTGCCGAA GAGCCTGATG GATCTTTCCG ATCCGTCCTG GTCCGGCCGT TTCGGCTTCG TGCCCACCAG TGGCGCCTTC CTCGAACAGG TCGCCGCAGT GATCAAGCTC AAGGGCCAGG AGGAAGCCGA GGATTGGCTG ACCGGCCTGA AGGCCTTCGG CTCGATCTAC ACCAACAACG TCACCGCCAT GAAAGCCGTG GAGAACGGCG AGGTCGACAT GGCGCTGATC AACAACTACT ACTGGTACAC CCTGAAAAAG GAAAAGGGCG AGTTGAACTC GCGCCTGCAC TACTTCGGCA ACCAGGACCC GGGCGCGCTG GTCACCGTCT CCGGCGCCGC AGTGCTCAAG TCCAGCAAGC ACCCCAGGGA AGCCCAGCAG TTCGTCGCCT TCATGCTCAG CGAGGAAGGC CAGAAGGCGA TCCTCAGCCA GTCCGCCGAG TACCCGATGC GCAAGGGGAT GCAGGCCGAT CCGGCGCTGA AGCCGTTCGC CGAACTGGAC CCACCGAAAC TGACCCCGGC CGACCTGGGT GAGGCCAGCG AGGCCCTCAG CCTCGAACGC GACGTTGGCC TGAATTGA
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Protein sequence | MPVRLLNRFR HAALACLLGS LSLNAAADPV TLTLYNGQHA ATGIAIAKAF QDKTGIQVKI RKGGDGQLAS QITEEGARSP ADVLYTEESP PLIRLASAGL LAKLEPETLA LVEPEHAGGN GDWIGITART RVLAYNPKKI DEKDLPKSLM DLSDPSWSGR FGFVPTSGAF LEQVAAVIKL KGQEEAEDWL TGLKAFGSIY TNNVTAMKAV ENGEVDMALI NNYYWYTLKK EKGELNSRLH YFGNQDPGAL VTVSGAAVLK SSKHPREAQQ FVAFMLSEEG QKAILSQSAE YPMRKGMQAD PALKPFAELD PPKLTPADLG EASEALSLER DVGLN
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