| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_61850 |
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| Symbol | |
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| ID | 4385673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 5515120 |
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| End bp | 5517348 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639327591 |
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| Product | putative TonB-dependent receptor |
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| Protein accession | YP_793137 |
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| Protein GI | 116052820 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.00865386 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCCGCT CCATCCCTTC GCGCCCGGCT CCCCTGGCGC TTTCCCTGTC CCTCTTCGCT
TCGTTTTCCG CTCCTGCGCT GGCTGCCGAT CCGGTGGAGC AGCAGATGGT GGTGATCGGC
TCGCGCGCGC CGACCAGCAT CAGCGAGTTG CCCGGCACGG TCTGGGTGAT CGAGCGCGAG
CAACTGGACC AGCAGACCCA GGCCGGCGTG CCGCTGAAGG AGGCGTTGGG ACAATTGATC
CCGGGCCTGG ATATCGGCTC CCAGGGTCGT ACCAACAACG GGCAGAACCT GCGCGGACGC
AGCGTGCTGG TGATGATCGA CGGGGTGTCG CTGAACAGTT CGCGGGGCAT CAGCCGGCAG
TTCGACTCCA TCGACCCATT CAACATCGAG CGCATCGAGG TGATGTCCGG CGCCAGCGCG
GTGTACGGCG GCGGCGCCAC CGGCGGGATC ATCAACATCG TGACCAAGAA GGGCGTCGGC
GGCGACACTC GCTTCAATAC CGAGCTGGGC GCCCGCAGCG GCTTCCAGAG CCATGAGGAC
CATGACCTGC GCGCGGCGCA GTCGATCAGC GGCGGCAACG ACCTGTTCAA CGGCCGCCTG
GCCATCGCCT ACCAGAAGAA CGGCGCGGCC TACGACGGCA ATGGCGACCA GGTACTGACG
GACATCACCC AGACCGACCT ACAGTACAAC AGGTCGGTGG ACCTGATGGG CAGCCTTGGC
TTCACTTTCG CCAATGGCCA CAGCCTCGAT CTCGGCCTGC AGTACTACGA CTCCGGCTAC
GACGGCGACC GCGGCCTCGA TCTCGGGCGC AACTTCGACG CCCTGCGTGG ACGGGCACCC
TATTCGATCA AGGGCGGCGT CGACCTCGAC CGCGAGCCGG AAAGCAAGCG CCATCAGTTC
AACGCCACCT ACCATGCGCC GGAAGTGCTG GGTCACGACC TCTACCTGCA GGCCTACTAC
CGCAACGAGA AGATGGCCTT CAACCCCTTC CCCACCATCC GCTACAGCAA TAGTGGCGCA
ATCAACTACG GCACTTCCTA CTACTCGGCC TCGCAGCAGG ACACTGACTA CTACGGGATG
AAACTGGCCC TGGTGAAGAC CTGGGAGCGC GCCAGCCTGA CCTACGGGGT GGACCTGGAC
CGGGAAAAAT TCACGTCCGA CCAGATGCTC TTCAACCTGC CGCTCGCCGC CGCCAGCGGC
GGGCTGGTAG CCAGTGAACA GGCCAAGCTG GGCCGCTACC CGGACATCGA TACCGACAGC
CGCGCCTTCT TCCTCCAGGG CAGTTGGAAG GCCACCGACG ACCTGACCCT GAGCGCCGGC
GTGCGGCGCC AGTCGATGAG CACCGACGTC AGCGACTTCG TTGCGGCGAA CCAGCAGATC
CTCATCGCCA ACGGCCTTGG CAAGACCGCC GACGCGGTTC CGGGCGGGAG CAAGGACTAC
GACGTCAACC TGGTCAACGT CGGCGCCATC TACAAGCTGA ACCTGCAACA ACAGGTCTGG
GCCAACTACA GCGAAGGCTT CGAGCTGCCG GACCCGGCCA AGTACTACGG TTTCGGACGC
TACGGCGCAG CCGACGGCAA TGGCCACTAC CCGCTGCTAC AGGGGGTCAG CGTGAACGAC
TCGCCGCTGG ACGGGATCAA GACCAAGCAG GTCGAGCTGG GCTGGCGGCA CACCGACGGT
GCCCTGGATA CCCAGGTGGC GGCGTTCTAT TCCTGGTCGG ACAAGAGCAT CAAGTACGAC
TCGAAGACCC TGGCGGTGCT GCAGCAGGAC ACCAAGAAGC GCAACTACGG CCTGGAGGGC
CAGGCTACCT ACTGGCTGGA CGATCACTGG CAGCTCGGCG TCAACGGCCT GGCCATCCGC
TCCCAGGAGA AGGTCGACGG CCGCTGGCTG AAGCAGGACG TGACCTCGGC CAGCCCATCC
AAGGCCGGCG CCTTCGTCGG CTGGAAGGAC GACCAGCGCA GCCTGCGCCT GCAGGGCGTG
CGCACCTTCA ACCTGAACGA CGAGCCGGGC AACAAGATCG ACGGCTACGC GCTGTTCGAC
CTGCTCGGCA CCCAGGCGCT GCCGGTGGGC ACCCTCACCG CGGGCATCCA GAACCTGCTG
GACAAGGACT ACACCACGGT CTGGGGACAA CGCGCCCAGG TCTACTACGG CGGGCTCGCA
CCAGCGGGAC TGTTCGACTA CAAGGGACGG GGGCGGACCT ACAGCCTGAC GTATAGCGTG
GAGTTCTGA
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| Protein sequence | MPRSIPSRPA PLALSLSLFA SFSAPALAAD PVEQQMVVIG SRAPTSISEL PGTVWVIERE
QLDQQTQAGV PLKEALGQLI PGLDIGSQGR TNNGQNLRGR SVLVMIDGVS LNSSRGISRQ
FDSIDPFNIE RIEVMSGASA VYGGGATGGI INIVTKKGVG GDTRFNTELG ARSGFQSHED
HDLRAAQSIS GGNDLFNGRL AIAYQKNGAA YDGNGDQVLT DITQTDLQYN RSVDLMGSLG
FTFANGHSLD LGLQYYDSGY DGDRGLDLGR NFDALRGRAP YSIKGGVDLD REPESKRHQF
NATYHAPEVL GHDLYLQAYY RNEKMAFNPF PTIRYSNSGA INYGTSYYSA SQQDTDYYGM
KLALVKTWER ASLTYGVDLD REKFTSDQML FNLPLAAASG GLVASEQAKL GRYPDIDTDS
RAFFLQGSWK ATDDLTLSAG VRRQSMSTDV SDFVAANQQI LIANGLGKTA DAVPGGSKDY
DVNLVNVGAI YKLNLQQQVW ANYSEGFELP DPAKYYGFGR YGAADGNGHY PLLQGVSVND
SPLDGIKTKQ VELGWRHTDG ALDTQVAAFY SWSDKSIKYD SKTLAVLQQD TKKRNYGLEG
QATYWLDDHW QLGVNGLAIR SQEKVDGRWL KQDVTSASPS KAGAFVGWKD DQRSLRLQGV
RTFNLNDEPG NKIDGYALFD LLGTQALPVG TLTAGIQNLL DKDYTTVWGQ RAQVYYGGLA
PAGLFDYKGR GRTYSLTYSV EF
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