Gene PA14_61220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_61220 
Symbol 
ID4382994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5466256 
End bp5467254 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content72% 
IMG OID639327539 
Producthypothetical protein 
Protein accessionYP_793087 
Protein GI116052770 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2813] 16S RNA G1207 methylase RsmC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.527408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCCTC GCAGTGAAGT GCTGCTGCGC CAGCGCCACC TCTTCGCGAC CCCGCTGCTG 
CTGGCCGGCC TGCCCGCCGA CGACCTGCTC GCCGAGCTAC CGCAGGCCCA GGGCTGGAGC
TGGCACGCCG GCGAGCAGGC GCAGCTGGAC GCCCGCTTCC CCGACCGTAG CCGTTTCGAC
ACGCGCGCGC CGACCGGCGC CTGGACTTCG GCCGTTCTGT TCCTGCCCAA GTCCCGCGAA
CTGACCGACT ACCTGCTGGC CAGCCTGGCC GCCCGCCTGC CCGGCGGCGA ACTCTTCCTG
GTCGGCGAAA AGCGCGGCGG GATCGAGCGC GCGAGCAAGC AGTTGGCCGC CTACGGCAAG
CCCCGCAAAC TGGATAGCGC GCGGCATTGC CAGCTCTGGC AGGTGCGTAT CGAACAGGCG
CCGGCCGAGC CCGACCTGCA CGCCCTGGCC CAGCGCTACA GCCTGCCGCT GGCCGATGGC
GAGCTGCAGG TGGTGAGCCT GCCGGGGGTG TTCAGCCATG GCCGCCTGGA TCGCGGCAGC
GCGCTGCTGC TGGGGCAACT GCAAGCCCTG CCCGGCGGCC ATCTGCTGGA CTTCGGCTGC
GGTGCCGGCG TACTCGGGGC GGTCCTCAAG CGTCGCTACC CCGCCAGTCG CCTGACTCTG
CTCGACGTCG ACGCCTTCGC TGTCGAGAGC AGCCGACTGA CCCTCGCCGC CAACGGCCTG
GACGGCGAAG TGATCGCCGC CGACGGCATC GACGGCGCGC CGCGCGAACT CGCCGCGATC
GTCAGCAACC CGCCCTTCCA CCAGGGCGTG CACACCGACT ACCAGGCCTC CGAGCGCCTG
CTGCAACGCG CCGCCGAGCA CCTGGCGCCG GGCGGCGAAC TGCGCCTGGT CGCCAACAGC
TTCCTGAAGT ACCCGCCGTT GATCGAACGC CACCTCGGCC CCTGCCGGAC ACTCGCCGAA
GGCGACGGTT TCCGCATCTA CTCCGCCCGT CGCTCCTGA
 
Protein sequence
MDPRSEVLLR QRHLFATPLL LAGLPADDLL AELPQAQGWS WHAGEQAQLD ARFPDRSRFD 
TRAPTGAWTS AVLFLPKSRE LTDYLLASLA ARLPGGELFL VGEKRGGIER ASKQLAAYGK
PRKLDSARHC QLWQVRIEQA PAEPDLHALA QRYSLPLADG ELQVVSLPGV FSHGRLDRGS
ALLLGQLQAL PGGHLLDFGC GAGVLGAVLK RRYPASRLTL LDVDAFAVES SRLTLAANGL
DGEVIAADGI DGAPRELAAI VSNPPFHQGV HTDYQASERL LQRAAEHLAP GGELRLVANS
FLKYPPLIER HLGPCRTLAE GDGFRIYSAR RS