Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_60310 |
Symbol | pilY1 |
ID | 4385727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5373154 |
End bp | 5376630 |
Gene Length | 3477 bp |
Protein Length | 1158 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639327465 |
Product | type 4 fimbrial biogenesis protein PilY1 |
Protein accession | YP_793014 |
Protein GI | 116052698 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00000469014 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCCACC AGATTACCCG CGCAGGAAAA AGCCTGCTGG CTGCAGGTTG CACCCTGAGC ATCCTGTTCG CCTCTGACAG TTATGCCGCC ACGGCCCTGA ATGTCAGCCA GCAACCCCTG TTCCTAACCC AGGGCGTTGC TCCCAACCTG CTGTTCACTC TAGATGACTC AGGCAGTATG GCCTGGGCTT ACGTGCCCGA CGGTATTAGC GGGAATAGCG GCAGAGCGGG ACGTTCCAGC GATTACAACG CACTGTACTA CAACCCCGAT TATGCTTACC AAGTGCCCAA GAAATTGACA CTGTCAGGCG ATCAGATCAT CGTTTCCGAC TATCCAGTGC CACGCTTCAC AGCAGCCTGG CAGGATGGCT ACGCCCAAGG CTCCACCACC AACCTGAGCA ATAACTATCG CCCTCAATGG GGAACCGGCT GGCTTGGTTG CATCGATAGC AGCTGCAATA CCGGGAGAGC TTATTACTAT ACTTATAAGG TAAGCGCTAG CTGCCCTGCA CAGCCGGTGA GCAGCTCCAA CTCCTGTTAT ACCTACAATG CTCTTCCTAC CAGTCAGGAA AGCAACTTTG CGATATGGTA CTCCTACTAT CGCAACCGCA TCCTGGCCAC AAAGACCGCT GCCAACCTGG CCTTTTACAG CCTGCCGGAA AACGTGCGTC TCACTTGGGG GGCCCTGAAC ACCTGTAGCA TCGGCGCCAA CAGCAGAAGC TGCCAAAACA ATGCCCTGCT CCAATTCAAC AAGCAGCACA AAATCAATTT CTTCAATTGG CTGGCGAACA GCCCGGCCAG CGGCGGTACT CCTCTGCATG CGGCTCTTGA CCGAGCCGGA CGCTTCTTGC AAACCAACGG CACAGCTTAT ACCACCGAAG ACGGAAAGAC ATATTCCTGC CGGGCCAGCT ATCACATCAT GATGACCGAC GGTATCTGGA ACGGTCGGAA CGTCACCCCC GGCAATCTCG ACAACCAGAA CCAGACCTTT CCTGATAGCA CCCTCTATAG GCCACAGCCC CCTTATGCCG ACAGCAATGC CAGCTCATTG GCTGACCTGG CTTTCAAATA CTGGACCACA GACTTACGTC CCAGCATCGA CAATGACCTG AAGCCTTTCA TGGCCTACAA GAGTGGGGAC GATTCCAAGG ATTACTGGGA CCCTCGCAAC AACCCAGCCA CTTGGCAACA CATGGTCAAC TTTACCGTTG GCCTAGGTCT TTCCTATTCG CTCACATTGA ACTCTGCACC AACTTGGACA GGCAGCACCT TTGGCAACTA CGAGGAGTTG ATGGCTGGAA GCAAGGCTTG GCCCAGCGTC GATAACGACG CCGCACCCGG TAACGTCTAC GACCTCTGGC ATGCAGCTAT CAACTCTCGT GGAGACTTCT TTAGCGCGGA ATCACCGGAC TCTCTGGTTC AGGCTTTCAA TAAGATCCTG ACACGGATTT CCGAGCGCAA CACCTCCTCC TCCAAACCAG CAATGACTTC CGCGCTGCAG GATGACGGAA CCGGCGACAA GCTGATCCGC TACAGCTACC AGTCCAGCTT TGCCAGTGAC AAGAACTGGG CGGGCGACCT TATACGTTAC AAGGTGGAGT CGACTTCCAC CGGTTCGACC AAAACCCAGG AATGGAGCGC CGGCGCACTG CTGGACAACC GAGCTCCCGC TACCCGTAAT ATTTACATCG CCAGCAATAG CGGAACCAAC CGCCTTAAGC CTTTCACATG GAGCAATATT GAGGGAAGTC AGTTAGCCAC TTGGCTGAAC CGCAACCCGG ACAAGGACAA TCAGGCCGAC ACCAAAGGAG CACAGCGGGT CGACTTCATC CGTGGCCAGC AGAATATGGA TGGATTCCGG CAACGACAGG CGGTGTTAGG GGACATCGTG CACTCGTCTC CAGCCGTGGT CGGACCGGCC CAATACCTCA CTTATCTGGC CAACCCCATC GAACCCAGCG GCGACTACGG CACATTCAAG ACAGAGGCAG ACCAGCGCAG CCCTAGAGTT TATGTTGGAT CCAACGATGG CATGTTGCAT GGTTTCAACA TCAAAACCGG CGTGGAAGAG TTCGCTTTCA TCCCTACAGC AGTATTCGAA AAGCTTAACA AGCTTACCGG CATCAGCTAC CAGGGCGGTG CCCACCAATA TTTCGTCGAC GCTACACCGG TCGTCAGCGA TGCCTTTTTC GATGGAGCTT GGCACACTGT TCTGATCGGA ACGCTTGGTG CTGGAGGTCG CGGCCTGTTC GCACTCGATG TAACCAAGCC GGACGATGTC AAGCTGCTTT GGGAATACGA TAGCAGTACC GACTCGGACC TTGGTTACAC CTTCTCCAAA CCTACCGTAG CCAGACTGCA CAGCGGACAA TGGGCAGTAG TTACCGGCAA CGGCTATGGA AGCGATAATG ACAAGGCAGC TTTACTGCTG ATTGATTTGA AAAAGGGAAC GCTGATCAAG AAGCTGGAAG TCCAAAGCGA GCGCGGAATA GCCAATGGCC TATCGACGCC TCGCCTGGCT GATAACAACA GCGATGGCAT TGCTGACTAC GCCTATGCTG GCGATCTGCA GGGAAATATC TGGCGCTTCG ATTTGATCGG CAATACCCGC AACGACGACC CAGACACAAA TACCTCTATC AATCCCTTCA AGCCCGGAGA TGTAGATCCT TCTGCTTTCA GAGTATCGTT CAGCGGCGCC CCGCTTTTCC GTGCTCGCGC CGACAACAAT ACTCGTCAGC CCATCACGGC TCCGCCTACC TTGGTACGCC ATCCTAGCCG TAAGGGCTAC ATCGTCATCG TAGGTACAGG AAAATACTTC GAGGACGATG ACGCTCAGGC CGATACCAGC CGAGCCATGA CGCTCTATGG TATCTGGGAT CGCCAGACCA AGGGCGAAAG CGCAAACAGT ACCCCAACCA TCGACCGCAA CGCCCTCACA GCCCAAACCA TGACAACAGA GGCGAACTCC ACATTCGGTA GCGTGAACAG GAATATTCGG CTTATTAGCC AAAACCCGGT GAAGTGGTAC AAAGACGGAG CAACCGGTAC CGCGAACTCG GATGTGGCTA GCTATGGCTG GCGACTGAAT CTGGAGGTCA ATAGCAGCAA GAAAGGCGAA ATGATGATCG AAGATATGTT CGCTGCCGGC CAAGTGCTTC TATTGCAGAC CTTGACACCG AACGACGACC CTTGTGACAG CGGCTCTACC AGCTGGACCT ACGGCCTCAA TCCATATACT GGCGGACGTA CCAGTTTCAC CGTCTTCGAT CTCAAACGTG CGGGTATAGT GGACTCTGGC TCGGATTACA ACGGCTCGGT CGTATCCGCC TTCCAACAGG ATGGACTAGG TGGCTTGGCC ATTACCCAGA ACGAACAGCG TCAATCCGAG GCTTGCACTG GTGATGAGTG CATCATCTTC AACCCCAGCG ACAAGAGTAA CGGACGACAA ACCTGGCGGG TCGTCGAGGA GAAATGA
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Protein sequence | MIHQITRAGK SLLAAGCTLS ILFASDSYAA TALNVSQQPL FLTQGVAPNL LFTLDDSGSM AWAYVPDGIS GNSGRAGRSS DYNALYYNPD YAYQVPKKLT LSGDQIIVSD YPVPRFTAAW QDGYAQGSTT NLSNNYRPQW GTGWLGCIDS SCNTGRAYYY TYKVSASCPA QPVSSSNSCY TYNALPTSQE SNFAIWYSYY RNRILATKTA ANLAFYSLPE NVRLTWGALN TCSIGANSRS CQNNALLQFN KQHKINFFNW LANSPASGGT PLHAALDRAG RFLQTNGTAY TTEDGKTYSC RASYHIMMTD GIWNGRNVTP GNLDNQNQTF PDSTLYRPQP PYADSNASSL ADLAFKYWTT DLRPSIDNDL KPFMAYKSGD DSKDYWDPRN NPATWQHMVN FTVGLGLSYS LTLNSAPTWT GSTFGNYEEL MAGSKAWPSV DNDAAPGNVY DLWHAAINSR GDFFSAESPD SLVQAFNKIL TRISERNTSS SKPAMTSALQ DDGTGDKLIR YSYQSSFASD KNWAGDLIRY KVESTSTGST KTQEWSAGAL LDNRAPATRN IYIASNSGTN RLKPFTWSNI EGSQLATWLN RNPDKDNQAD TKGAQRVDFI RGQQNMDGFR QRQAVLGDIV HSSPAVVGPA QYLTYLANPI EPSGDYGTFK TEADQRSPRV YVGSNDGMLH GFNIKTGVEE FAFIPTAVFE KLNKLTGISY QGGAHQYFVD ATPVVSDAFF DGAWHTVLIG TLGAGGRGLF ALDVTKPDDV KLLWEYDSST DSDLGYTFSK PTVARLHSGQ WAVVTGNGYG SDNDKAALLL IDLKKGTLIK KLEVQSERGI ANGLSTPRLA DNNSDGIADY AYAGDLQGNI WRFDLIGNTR NDDPDTNTSI NPFKPGDVDP SAFRVSFSGA PLFRARADNN TRQPITAPPT LVRHPSRKGY IVIVGTGKYF EDDDAQADTS RAMTLYGIWD RQTKGESANS TPTIDRNALT AQTMTTEANS TFGSVNRNIR LISQNPVKWY KDGATGTANS DVASYGWRLN LEVNSSKKGE MMIEDMFAAG QVLLLQTLTP NDDPCDSGST SWTYGLNPYT GGRTSFTVFD LKRAGIVDSG SDYNGSVVSA FQQDGLGGLA ITQNEQRQSE ACTGDECIIF NPSDKSNGRQ TWRVVEEK
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