Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_59780 |
Symbol | rcsC |
ID | 4385472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 5320295 |
End bp | 5323549 |
Gene Length | 3255 bp |
Protein Length | 1084 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639327414 |
Product | putative kinase sensor protein |
Protein accession | YP_792966 |
Protein GI | 116052651 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000030188 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 3.75506e-17 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAAGTCTG CTAGTGCCTT GGAGCACGAC AACAAACTTT TGCTCAAATG GACAACCCTC TCGCAGAGCC TGAGCATCGG CTTGATCTGT GTGGTGGTGC TGACCGTATT GCTGTTCAGC ATCTGTTACT GGTCGCTGGG GAGATTGTTT CAGGAGGAGG AGGACAAAGT CTCCTTCCAC TTCACCCGTA TGATGGATGT TATACGGGAG CATGAGGTAT TTCTTGGGCG CATCGCTCGA AAAAGCGACA AGACCACCCA GAAGTACGAC TATGACGTGG TGCCTTTGCA GCGGCACTTG TTGGCAAAGG AAAACGGATT AGCGGTCTAT GAGGGACGGG AGTTTTCCTT TGCTATGCCA TTTCTACTGG CTACCAAGCA CGCGTTGAGC GCCGATTCCT CGGGAGATCC GTTTTCGCTC GGTGTATTGC TCGCCAATTT CTACGGAAGC TTCTGGAGTG TTTCCGCCTA TCCCGCGCCA CAGTTACTGA TCTTTGATCT TTCCGGCAGC ACCCGCCTGG CAGTGCCGTC GATTCCCTCC ACAGCGCAGC GTGACAGGTT GAGCGGAAGC TATCCGATGA TAGTCGAGCG CATTCTGGCG CGCTTGCGCA CCCGGCCGGT GGGGGAGGAC GCTCAGCGTG TCCATTGGAT ACGCGCTGAT CGCTATCGCG ACTCGGCGCT GGAGATGTTG GGAGTCGCCC GGGTTGATCT GCCGGAAACA CTCTGGTGGC ACGACGAGCC GAACCATCTG ATCATCGCTG CGAGCCTGCT TGATCTCAGG CGAATCAATG ACTTCGAACA GTTGGTTGAG CGCCCGGCAT TCGATTCGTA CAGCCTGGTA TCGCCGGATG GCGAGGTATT GCTCGGCGCG GCCCCTGCGA CCGGCCTGAG GGATGGCCTG AACCTCACCC GACAGGGGGT CGCCGTTCAA CTGCGCAGCC AGCCTGAGAA CGGCTGGCTC GCGGTCTACC GAACCGACTA CGGCAATTTC TTTCGCCACT CCCGGTGGCT GGTGGCAGGT CTGCTGCTGA CCCCGGCGCT GCTCCTGGCC GGTTGGCTCG GGATGCGTTG GTACACCAGC AGCGTCGTCA ACCCGGTGCA TCGGGCGCAC CGGCAACTGG TGGAGAGCGA CACCTTCAGC CGGACGCTGA TACAGACCGC GCCGGTGGCT CTGGTGGTGC TGACCCAGGA TGACCAGCAA CTGGTGACCT GCAACCACTT GGCCGCCCAG TGGCTGGGCG GGCCCACGGA GATCCTTGGG CTGACTTCCA ACTGGAAGCT TTTCGATGCG CGTGGGCAGG TACCAGGAGA CATCTGTATC CAGGTCGGTG GGCGCTATTT GCAGACCGCC TTCGCGGCGA CCCGCTATGC CGGCACCGAG GCGGTACTGT GCGTATTCAA CGACATCACG GTCCACTGCG AGGCGGAGAC CGCGCTGTCC AATGCGAAGC GAGCAGCGGA TGCCGCCAGC CAGGCCAAGA CCCTGTTCCT GGCCCGCATG AGCCATGAAA TCCGTACTCC CCTGTACGGT GTCCTTGGCA CCCTGGAGTT GCTCGACCTG ACCACCCTGA ACGAGCGGCA ACGCGCCTAC CTACGCACCA TCCAGAGTTC GTCTGCGACG CTCATGCAAC TGATTAGCGA TGTGCTGGAT GTCTCGAAGA TCGAAGCGGG GCAGATGGCT CTGACCCTGG CCGCCTTCAA TCCGCTGGAC CTAGTGCGGG AAGTGCTTGG CAACTTTGCC GCCAGCGCCA TGGCCAAGGA CCTGCAGTTC TATGCCTGCA TCGACACCGA AGTGCCGGCG CAACTGATCG GTGACGTGAC GCGGATTCGC CAGGTGCTCA ATAACTTGGT GAATAACGCG CTGAAGTTCA CCGATATCGG ACGGGTGGTC CTGCGCGTGA AGTTGCTCTC CCGCAATGAT GGTCGAGCCC TGTTGCAGTG GCAGGTCGCC GACACCGGTA TCGGTATCGC ACACGAACAG CAGGAGCGCT TGTTCGAGGC GTTCTACCAG GTTTCGGGAG CGCACCATGC CGGCGGCACG GGGCTAGGAC TGTCGATCTG CTGGCATCTG GCGGAAATGA TGGGCGGTCA CCTGCGAATG GTCAGCGAGA CAGGGCTCGG CAGCAGCTTC AGCCTGGTGC TCGAGTTGCC CGAGGACGAA CAGTCCGGGC TGGCTTGCCG GCCGGGGCTC TTGAAATCCG CTTGCGTCCA TGTGCGCTCG CCCGTGCGGG AGCTAGCCGA CAGCGTAGGG GCGTGGCTGA AAGCCTGGGG CTGCAAGGTC AGCAGCGGCG AGGCGGCGCC CTCCGAGCTG GAGACTTGTG TGCTTCTGGA GCTGCTGCCG ATGGCGGCCG GGCCTGCTTC TTCGCCCTGG CCAGGCCCCC GGGTGCGCGC GTCCATGGAT GCGCCTTGCC AGCCGGAGCT GCGTGAGGAC GGCTGGCGTG TCGGCCTGCA CAACCTGGCG GGAATCGGCC AGGCCCTGGC GCAGGCTCTG GGTGGCGATA TCCCCGAGCA AACGCCGGCA AATGCCTGCG CCCGCTCGGG GAGACTCGAC CTGGAAGTGC TGGTCGCCGA GGACAACCCA GTCAACCAGG CGCTGCTTCG CGAGCAACTG GAAGAGCTGG GTTGTCGCGT GAGCCTTGCC GGCGATGGGC GGCAGGCCCT GCAGCTGTTC GACAGTGGTC GCTTCGACCT CCTGCTCAGC GACGTCAACA TGCCGAACAT GACCGGCTAC GAACTGACCC AGGCGCTGCG CGAACGAGGC GAGACGCTGC CGATCATCGG CGTGACCGCC AACGCCCTGC GAGAAGAGGG CGAGCGCTGC CGGGCAGTGG GAATGAACAG TTGGCTGGTG AAGCCGATCA CTCTGCATAC CTTGCATGAA CTGCTCAGTG AGTTCGCTCG CGCAGGTGTC GTGCTTCCCG CGCAAGCGCG AGACCTCGGC CCGCCCGCGC AGCTCGACGA CGGTCTCTCA CCGCAGGTGC CGGAACGCAT GCGCGCGCTT TTCCTTGAGA CCATGGGCAA GGACCTGGAG GCCGCCCGGC AAGCGATTCG CCGCAACGAC CCGAAGGGGC TGCAGCAGGA CCTGCATCGC ATGGCCGGCT CCCTGGCGGT GATGCGTGCG CGAACGCTGG TGGTGATGTG TCAGGGCGCC GAGGAAGGCC TGCTGGAGTC GCGCCTTGAA TGTTCCGCCG TGGAGATTGG CGAGGTGCTC GTTCATATCG AGCAGGCGCT GGAGTTTGTG AGAAAGACGG GCTGA
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Protein sequence | MKSASALEHD NKLLLKWTTL SQSLSIGLIC VVVLTVLLFS ICYWSLGRLF QEEEDKVSFH FTRMMDVIRE HEVFLGRIAR KSDKTTQKYD YDVVPLQRHL LAKENGLAVY EGREFSFAMP FLLATKHALS ADSSGDPFSL GVLLANFYGS FWSVSAYPAP QLLIFDLSGS TRLAVPSIPS TAQRDRLSGS YPMIVERILA RLRTRPVGED AQRVHWIRAD RYRDSALEML GVARVDLPET LWWHDEPNHL IIAASLLDLR RINDFEQLVE RPAFDSYSLV SPDGEVLLGA APATGLRDGL NLTRQGVAVQ LRSQPENGWL AVYRTDYGNF FRHSRWLVAG LLLTPALLLA GWLGMRWYTS SVVNPVHRAH RQLVESDTFS RTLIQTAPVA LVVLTQDDQQ LVTCNHLAAQ WLGGPTEILG LTSNWKLFDA RGQVPGDICI QVGGRYLQTA FAATRYAGTE AVLCVFNDIT VHCEAETALS NAKRAADAAS QAKTLFLARM SHEIRTPLYG VLGTLELLDL TTLNERQRAY LRTIQSSSAT LMQLISDVLD VSKIEAGQMA LTLAAFNPLD LVREVLGNFA ASAMAKDLQF YACIDTEVPA QLIGDVTRIR QVLNNLVNNA LKFTDIGRVV LRVKLLSRND GRALLQWQVA DTGIGIAHEQ QERLFEAFYQ VSGAHHAGGT GLGLSICWHL AEMMGGHLRM VSETGLGSSF SLVLELPEDE QSGLACRPGL LKSACVHVRS PVRELADSVG AWLKAWGCKV SSGEAAPSEL ETCVLLELLP MAAGPASSPW PGPRVRASMD APCQPELRED GWRVGLHNLA GIGQALAQAL GGDIPEQTPA NACARSGRLD LEVLVAEDNP VNQALLREQL EELGCRVSLA GDGRQALQLF DSGRFDLLLS DVNMPNMTGY ELTQALRERG ETLPIIGVTA NALREEGERC RAVGMNSWLV KPITLHTLHE LLSEFARAGV VLPAQARDLG PPAQLDDGLS PQVPERMRAL FLETMGKDLE AARQAIRRND PKGLQQDLHR MAGSLAVMRA RTLVVMCQGA EEGLLESRLE CSAVEIGEVL VHIEQALEFV RKTG
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