| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_59240 |
|---|
| Symbol | pilL2 |
|---|
| ID | 4382733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 5277443 |
|---|
| End bp | 5278567 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639327368 |
|---|
| Product | type IV B pilus protein |
|---|
| Protein accession | YP_792920 |
|---|
| Protein GI | 116052605 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.000264935 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0000258548 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGGC AGTTGACCAC TCTCACGCTG TGCCTGCTGC TCGCCAGCTG CACGACCCAC
AAGGCTGAGC CGGCCAGGCC AGCCTTCGAC AGCAGCCGCA ATCCAGACCT GCTTTCTCCG
GACCTGTATC CAAACGGTGT GCAGCCGGAG AAAGAGCCCG TAGTGCGCTA TGGGCGCTAC
ACCCTGGTCA GCACCCAGCC TGATGCCGGT CAACGCGACC TGATGGCCCA GATCATCGAC
GTAACCATCC CGTCGAGCAT GAACCCGAGC GTCAAGGACG CCATGCAGTA CGTGATGAGC
CGCTCGGGTT ACTCGCTGTG CCCGGCAGAC GCCGGTCATG TGAACATCCT CTACACCCGG
CCGCTGCCGG CAGCTCAGTA CAAGCTCGGC CCGATGACCC TGCGCAACAC CCTCCAGGTC
CTCTCCGGCC CAGCCTGGCA GGTTAAGGTC GACGAGGTCG CGCGGCAGGT CTGCTTCGTG
CTGCGCCCGG GCTATCAACT TCCCCCGGCG CCGAGGCCGA AACCGGTCCA GCAACTGTAT
GCGAAGCCCG CTGCCCCAAC TCCGCCGGCG GTAGCGCAAC CCTCCTCCAC GGAGAAAGTC
AGCACGCTGG AGTCGCCCAT CGTGGTCGCC TCGGTGCCGA CACCGGCGCC GATCACAACC
AGCCACGCTC CGGCCAAGAA GCCTGAATCC ACCACTGTGC TCCCCCCAGC CGCACCGGCC
AAGGATGGCC ACCCCTCTTC TCCTCCCGCG GCTTCGGCAC CGACCAAGCC TGCGGCCTCC
GCCGTGAAGT CCACGCCGCC CACTCCACCC ACCGTGGCTT CCGCCCCACC GGTCAAGGTG
CTCACGCCGC CGGAACCGAG CCGGCCGCTG GCACAGGCCT GGTCAGCCGA GACGGGATCA
ACCCTGCGCG ACACCTTGGA AGCTTGGGCA AAGCGCGCAC GCTGGACCGT CCGCTGGGAG
CCGCAGGATC TCAACTATCC GATCGAGGCT CCACTGACCT TCCACGGCTC CTTCGAGGAC
GCGGTATCCG AGCTGTTCCC CCTGTATGAC GCTGCCGAAC GGCCCTTCCT GGTGAACGCC
AGCCGCCCGC AGTCCCTGAT CATCATCAAG GAGCGCAAGA ACTGA
|
|---|
| Protein sequence | MTRQLTTLTL CLLLASCTTH KAEPARPAFD SSRNPDLLSP DLYPNGVQPE KEPVVRYGRY
TLVSTQPDAG QRDLMAQIID VTIPSSMNPS VKDAMQYVMS RSGYSLCPAD AGHVNILYTR
PLPAAQYKLG PMTLRNTLQV LSGPAWQVKV DEVARQVCFV LRPGYQLPPA PRPKPVQQLY
AKPAAPTPPA VAQPSSTEKV STLESPIVVA SVPTPAPITT SHAPAKKPES TTVLPPAAPA
KDGHPSSPPA ASAPTKPAAS AVKSTPPTPP TVASAPPVKV LTPPEPSRPL AQAWSAETGS
TLRDTLEAWA KRARWTVRWE PQDLNYPIEA PLTFHGSFED AVSELFPLYD AAERPFLVNA
SRPQSLIIIK ERKN
|
|---|
| |