Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_58890 |
Symbol | |
ID | 4382662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5245268 |
End bp | 5246905 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639327335 |
Product | putative hemolysin activation/secretion protein |
Protein accession | YP_792887 |
Protein GI | 116052572 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2831] Hemolysin activation/secretion protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.0280329 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAATGG CCATGCTGTC GTCCTGCCTT GCCAGTGCCG CCCCGGATGC GGGGCAGGCG CTGCGTGACG TGGAAAGCCG ACGCCTGAAC CTGCCCGCGC CGGTGGAACT GGACGCCGAG CGCCCCAGCC CCGAGGACGG CGTATCACGG GCTGCCGAAG AGGGCGGCCC GACGGTGCTG GTCAAGCGCT TCCAACTCAG CGGCAACAGG CAGCTCGACG ATCGACGCCT GCTGGCGCTC CTGCACGACC TGCCGGGCCA GGAACTCAAT CTGAGCCAAT TGCACGCCGC CGCCGCCCGC ATCGGCGATT TCTATCGGGA AAAGGGATAT GTGCTGGCGC GCGCCTTCCT CCCGGCACAG GAAATCCAGG ATGGAACGGT ACGCATCGAA GTGCTCGAGG GACGCTACGG CAGGATCGAA CTGCACAACA CGTCCCGAAC GCTGGACCGC GTTCTACTCC GCCCCTTGAG CGCACTCGAA CGAGATACCG CGGTCCAGGG CTCCGAGCTG GAGCGTGCGC TTCTGCTCCT GAGCGACATT CCCGGCCTCC AGGCCAAAGG CACCCTGCTG CCGGGCCAGG CGCAGGGAAC CACGGACTTG CGCGTCGAGG CCCGCCCCGG CCCGCTGGTC GGCGGCAGGC TGGAGGCAGA CAACTATGGC GGCCGCTACA TGGGGGAATA TCGCCTGGGA ACCACCCTCG ACTTCAACAG CCCGCTGCGA CTGGGCGACC AGGCGAGACT GAGCCTGCTG GGCAGCGATC GGCACCAACG CTACTACCGT GCAGCCTATC AACTGCCCCT TGGTTCCCGA GGCACGCGCA TCGGACTGGC CCACGCCGAG ACGACCTATC GACTGGTACG CGATTTCTCG CGCCTGGACG CCCATGGCCG GGCCATTACC GACAGCCTGT TCGTCAGCCA GCCCCTGCTG CGTAGCCGCA GCTTAAGCCT GTCCACCCAG TTGCAATATG AAAACAAGCG ACTTCGCGAT GACCAGGAGC GTACCGGGAG GCATAGCCGC AAGGAGATCC GCCTGTGGAC CGCCAGCATC AGCGGAAACG CCCAGGACCG CTTGTTCGGC GGTGGACAGA GCGGCTTCTC GCTGGCCTAT GCCCACGGCC AGCTCGCCAT CGACTCCGCC GAAGAGCGGC TGCTGGACCG CTACACCATC GGTACCGCCG GCAGCTTCGA CAAGATCATG CTCAACGCCG TACGCCTGCA GCACCTGGGC GACCGCCTGC AGTTGTTCGC CCAACTCAAC GCCCAGTGGA GCGGCGGCAA CCTCGACAGC GCGGAACAGT TCGACATGGG CGGCCCCTAC GGCGTTCGGG CGTTCCCCCT GGGCAGCTAC AAGGGCTACG GCGACGAAGG CTGGCAAGCC AGTGCGGAGC TGCGCTACAG CCTGGCTCCG GGCTGGCAGC TGAGTTCGTT CATCGACCAG GGAGCGGTGA AATTCCTCAA GCACCCCAAC ACCAAGGAAG GCAATCGCAA CCGCATGGCC GCCGTCGGCA GCGGCGCAAC CTGGTACGGA ACGGATCACC AGGTCAGCCT GACCGCCGCC TGGCCCCTGA GCCAGGAAAA CAACATCGAG CCCGAGCGCA CTCCCCGGCT GTGGCTGCAA GCGACCCGCT ACTTCTGA
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Protein sequence | MGMAMLSSCL ASAAPDAGQA LRDVESRRLN LPAPVELDAE RPSPEDGVSR AAEEGGPTVL VKRFQLSGNR QLDDRRLLAL LHDLPGQELN LSQLHAAAAR IGDFYREKGY VLARAFLPAQ EIQDGTVRIE VLEGRYGRIE LHNTSRTLDR VLLRPLSALE RDTAVQGSEL ERALLLLSDI PGLQAKGTLL PGQAQGTTDL RVEARPGPLV GGRLEADNYG GRYMGEYRLG TTLDFNSPLR LGDQARLSLL GSDRHQRYYR AAYQLPLGSR GTRIGLAHAE TTYRLVRDFS RLDAHGRAIT DSLFVSQPLL RSRSLSLSTQ LQYENKRLRD DQERTGRHSR KEIRLWTASI SGNAQDRLFG GGQSGFSLAY AHGQLAIDSA EERLLDRYTI GTAGSFDKIM LNAVRLQHLG DRLQLFAQLN AQWSGGNLDS AEQFDMGGPY GVRAFPLGSY KGYGDEGWQA SAELRYSLAP GWQLSSFIDQ GAVKFLKHPN TKEGNRNRMA AVGSGATWYG TDHQVSLTAA WPLSQENNIE PERTPRLWLQ ATRYF
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