| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_58760 |
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| Symbol | pilC |
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| ID | 4382649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 5236082 |
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| End bp | 5237203 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639327322 |
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| Product | type 4 fimbrial biogenesis protein pilC |
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| Protein accession | YP_792874 |
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| Protein GI | 116052559 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.95906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.743894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGTGA AGGCTCAACT GCGCAAACAG GGTATCAACC CACTAAAGGT CCGCAAGAAA
GGTATCACCC TGTTTGGGGC AGGGAAGAAG ATTAAGCCCA TGGACATCGC CCTGTTCACT
CGGCAGATGT CTACCATGAT GGGTGCCGGC GTACCGTTAC TGCAATCTTT TGACATCATC
GGCGAAGGAT TCGAAAATCC AAACATGCGC AAGCTAGTCG ATGAGATCAA GCAGGATGTT
GCCGCCGGTA ACAGCTTAGC CAGTTCACTT CGAAAGAAAC CCATTTACTT CGATGATCTC
TACTGCAACC TGGTCGATGC TGGCGAACAG TCCGGTGCTT TGGAGACATT ATTGGATCGG
GTAGCAACTT ATAAAGAAAA GACAGAATCC CTGAAAGCCA AAATTAAAAA AGCCATGACT
TATCCCATTG CAGTAATTGT AGTGGCCCTT GTAGTATCGG CGATCCTTCT GATAAAAGTG
GTCCCACAGT TCCAGTCCGT ATTTGCAAAT TTTGGTGCCG AGTTGCCGGC CTTTACTCAA
ATGGTCATCA ATCTTTCCGA GATGCTTCAA GAGTGGTGGC TCATAGTGCT TATTGGTCTT
TTTGCCGCAG CTTTTGCATT TAGGGAAGCT CATCGGCGCT CGCAAAAACT GAGAGATTCA
GTAGATCGGG GCCTGCTGAA ACTACCTATC ATCGGCGGGA TACTTTACAA ATCAGCTATC
GCCCGCTACG CCCGAACGCT ATCCACTACC TTTGCGGCTG GAGTGCCTCT GGTAGAAGCT
CTGGACTCCG TTTCCGGAGC AACTGGCAAC GTGGTATTCA AGAATGCCGT TACCAAGATC
AAACAAGACG TGTCCAGCGG CATGCAATTG AACTTTTCCA TGCGCACCAC CAATGTTTTC
CCCAGTATGG CTATCCAGAT GGCTGCAATT GGCGAGGAAT CAGGTTCGCT AGATGAGATG
TTAGGAAAAG TTGCCGGTTT CTATGAGGAA GAAGTCGATA ACGCCGTCGA CAACCTGACA
ACGTTGATGG AGCCGATGAT CATGGCCGTG CTCGGCGTAC TGGTCGGCGG CCTGATCATC
GCTATGTATC TACCGATCTT CCAACTGGGT TCCGTTGTGT AA
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| Protein sequence | MLVKAQLRKQ GINPLKVRKK GITLFGAGKK IKPMDIALFT RQMSTMMGAG VPLLQSFDII
GEGFENPNMR KLVDEIKQDV AAGNSLASSL RKKPIYFDDL YCNLVDAGEQ SGALETLLDR
VATYKEKTES LKAKIKKAMT YPIAVIVVAL VVSAILLIKV VPQFQSVFAN FGAELPAFTQ
MVINLSEMLQ EWWLIVLIGL FAAAFAFREA HRRSQKLRDS VDRGLLKLPI IGGILYKSAI
ARYARTLSTT FAAGVPLVEA LDSVSGATGN VVFKNAVTKI KQDVSSGMQL NFSMRTTNVF
PSMAIQMAAI GEESGSLDEM LGKVAGFYEE EVDNAVDNLT TLMEPMIMAV LGVLVGGLII
AMYLPIFQLG SVV
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