Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_56560 |
Symbol | |
ID | 4382454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5042340 |
End bp | 5043095 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639327142 |
Product | hypothetical protein |
Protein accession | YP_792695 |
Protein GI | 116052384 |
COG category | [R] General function prediction only |
COG ID | [COG3176] Putative hemolysin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.492473 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGA CCGCCATTAC CCGCGAACCC GTCGCCGGAC GCCGCCTGAA GGCCGAGCGC CTGAACGGCG CCCGCGCCCT GCGCGAGGCC CAGGCCCTGC GCTACCGCGT ATTCAGCGCC GAGTTCGACG CCAAGCTCGA AGGCGCCGAA GACGGCCTCG ACCGCGACGA CTACGACCGT CACTGCGCAC ACATCGGCGT CCGCGACCTC GACAGCGGCG CCCTGGTGGC CACCACCCGG CTGCTCGACC ATCGCGCCGC CGAACGCCTC GGGCGCTTCT ACAGCGAAGA GGAGTTCCAC CTCTCCGGCC TCGACGCCCT GCACGGCCCG GTCCTGGAGA TCGGCCGCAC CTGCGTCGCT CCCGAATACC GCAACGGCGC CACCATCGCG GTACTCTGGG GCGAACTCGC CGAGGTCCTC AACGAGGGCG GCTACCGCTA CCTGATGGGC TGCGCCAGCA TTCCCATGCG CGACGGCGGT ATGCAGGCCA AGGCGGTGAT GCAGCGGCTG CGCGAACGCT ACCTGTGCAC CGACTACCTG CAGGCCGAGC CGAAGAACCC GCTGCCGCCG CTGGACGTCC CGGAAAACCT CACCGCCGAG CTGCCGCCGC TGCTCAAGGC CTACATGCGC CTGGGCGCGA AGATCTGCGG CGAGCCCTGC TGGGACCCGG ATTTCCAGGT CGCCGACGTG TTCATCCTGC TCAAGCGCGA CGAACTCTGC CCGCGCTACG CCCGCCACTT CAAGGCGGCG GTCTGA
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Protein sequence | MTQTAITREP VAGRRLKAER LNGARALREA QALRYRVFSA EFDAKLEGAE DGLDRDDYDR HCAHIGVRDL DSGALVATTR LLDHRAAERL GRFYSEEEFH LSGLDALHGP VLEIGRTCVA PEYRNGATIA VLWGELAEVL NEGGYRYLMG CASIPMRDGG MQAKAVMQRL RERYLCTDYL QAEPKNPLPP LDVPENLTAE LPPLLKAYMR LGAKICGEPC WDPDFQVADV FILLKRDELC PRYARHFKAA V
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