| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_55610 |
|---|
| Symbol | dnaE2 |
|---|
| ID | 4384917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 4948578 |
|---|
| End bp | 4951673 |
|---|
| Gene Length | 3096 bp |
|---|
| Protein Length | 1031 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639327067 |
|---|
| Product | error-prone DNA polymerase |
|---|
| Protein accession | YP_792625 |
|---|
| Protein GI | 116048576 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0587] DNA polymerase III, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.0362545 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGCAT GGCTGGTTCG CATGAGCGCC TACGCCGAAC TGCATTGCCT GTCCAACTTC
AGTTTCCAGC GCGGCGCCTC CAGCGCCGCG GAACTCTTCG CCCGTGCAGC GCGCCTGGGC
TATCGGGCCC TGGCGATCAC CGACGAATGC AGCCTGGCCG GTATCGTGCG GGCCTGGCAG
GCGGCGCGGG AGCATCAGGT ACAACTGATC GTCGGCAGCG AAATCCGCCT CGAACAGGGG
CCCAAGCTGG TCCTCCTGGC GGAGGACCTG GAGGGCTACC AGAACCTCTG TCGCCTCATC
ACCCGCGGCC GGCGACAAGC CGACAAGGGC CACTACCGGC TGCTGCGCGA AGACCTGCAA
CAGCCGCTCG CCGGCCTGTT GGCGATCTGG TTGCCGAACG ACCATGAGGA CGAGCAGGCT
GCCTGGCTCC GCGAACGCTT CCCCCAGCGC CTTTGGCTGG GCGTCGAGTT GCATCGCGGC
GCCGATGACG ATGCCCGCCT GGACAAACTG CTCGCGCTCG CCTCGCATCT CCGGCTACCG
CCCGTGGCCT GCGGCGACGT CCACATGCAC GCCCGCGGCA GGCGAGCCCT GCAGGACTGC
ATGACAGCGA TCCGCAACCA TCTGCCGGTC AGCGAGGCCG GCGCCTATCT CTTCCCCAAC
GGGGAACGCC ACCTGCGTAC CCTGGAGGCC CTGCAGGGTA TCTACCCGCA AGCCCTGCTG
GCGGAAACCC TGAAGATCGC CGAACGCTGC CGGTTCGATC TGGAACAGCT GAAATACCAG
TATCCACGCG AATTGGTACC GGCCGGACAC GACCCGGCGT CATGGCTCCG CCATCTCACC
GAACAGGGCA TCGCCAGGCG CTGGCCGAAC GGCGCGAGCG CCAAGGTCCG CAAGCAGATC
GAGAGAGAAC TCGAGCTGAT CGCCGAACTG GGCTATGAAA GCTATTTCCT CACCGTGCAG
GACATCGTCG CCTTCGCCCG GGGCCGAGAA ATCCTTTGCC AGGGCCGCGG CTCGGCGGCC
AATTCAGCAG TGTGCTTCGC CCTCGGCATC ACTGAGTTGG ACCCGGACCG GACCAACCTG
CTGTTCGAGC GCTTCCTTTC CCGCGAGCGC AACGAACCAC CGGACATCGA CGTGGATTTC
GAACACGAGC GCCGCGAGGA GGTCATCCAG TACGTTTTCA CACGCTACGG ACGCCAGCGC
GCGGCGCTGA CCGCGGTGGT CAGCACCTAC CACGGCGCCG GCGCGGTGCG CGACGTAGCC
AAGGCCCTGG GTCTGCCGCC CGAGCAGGTC GACGTCCTGG CCAACTGCTG CGGCCGCTGG
AGCGACCAGG CCCCCAGCGC CGAACGCCTG GAAGAGGCCG GCTTCGATCC GCAGAGTCCG
ATCCTGCGCC GGGTGCTGGC CCTGACCGGC GAGTTGATCG GTTTTCCGCG CCACCTCTCG
CAGCACCCCG GCGGCTTCGT CATCTCCGAG CAGCCATTGG ACACCCTGGT CCCGGTGGAG
AATGCCAGCA TGGCCGAACG CACGGTGATC CAGTGGGACA AGGACGATCT CGACGCGGTC
GGCCTGCTCA AGGTCGACGT CCTCGCCCTG GGCATGCTCA GCGCCCTGCG CCGCAGCTTC
GACCTGATCC ACGCGCTGCG CGGCGGCAAG CGGTTGAGCA TCGCCAGTAT CCCGAGCGAA
GACCCGGCCA CCTACGAAAT GATCAGCCGC GCCGATACCA TCGGTGTGTT CCAGATCGAA
TCGCGCGCAC AGATGGCCAT GCTGCCACGC CTGCGCCCGC AGAAGTTCTA CGACCTGGTG
ATCCAGGTCG CCATCGTCCG CCCAGGGCCG ATCCAGGGCG ACATGGTGCA TCCTTACCTG
CGCCGGCGAA ACGGAGAAGA GCCGGTGGCC TATCCGTCAG CCGAACTGGA GGAAGTCTTC
GAACGAACCC TGGGCGTCCC GTTGTTCCAG GAACAGGTCA TGGAACTGGC GATCGTCGCC
GCCGACTACA CGCCGGGCGA GGCGGACGAA CTGCGTCGTT CGATGGCCGC CTGGAAGCGT
CATGGCGGCC TGGAACACCA CCGCGAGCGG CTGACCCGGG GCATGCTCGC CAACGGCTAC
GAGGCCGACT TCGCAGCGCG CATCTTCGAG CAGATCAAAG GCTTCGGCAG CTACGGTTTC
CCTGAATCCC ACGCCGCCAG CTTCGCCCTG CTCACCTACG CCAGCAGTTG GCTGAAACGT
CACGAGCCGG CGGCCTTCGC CTGCGCCTTG ATAAACAGTT GGCCGATGGG CTTCTACAGC
CCCGACCAGT TGCTCCAGGA CGCCCGCCGC CACGCCCTGC AGACACGCCC GGTGGATGTC
CGCCACAGCG GTTGGGATTG CAGCCTGGAG CCGTTCGGCC AGGCGCAACC GGCCATACGC
CTTGGCCTGC GGATGATCCG AGGCTTTCGC GAGGAGGATG CCAGGCGTAT CGAGCAGGTC
CGGGAGGCCC AACCGTTCCT CGACGTGCAC GATCTTGGCC GACGCGCCAG GCTCGACGCC
CGGGCCCTGG AGTTGCTGGC CGATGCCGGC GCCCTGCGCG GTCTCGCCGG ACACCGGCAC
AAGGCGCGCT GGGCCGTCGC CAGCGTCGAG CCGCAATTGC CGCTGTTCGC CGAAGGGACC
GTCATCGAAG AGAGCACGGT CAGCCTGCCA CTGCCTTCGC GCGGCGAGGA ACTGCTGAGC
GATTACGCTC TCCTCGGCAC CACCCTCGGC CCGCATCCGC TGAAACTCTT GCGTGGACAG
CTCAAGGCCC GCCGCTGCCG CGACTCCCGC GAACTGGCGA AACTGGGACA TGGACGACCG
ATACGGGTCG CCGGCCTGGT GGTCGGCCGG CAGCGCCCAC AGACCGCCAG CGGCATCACC
TTCATCACCC TGGAGGACGA GTTCGGCATG GTCAACGTGG TGGTCCGGCA CGACCTTGCC
GAACGGCAGA GGCGGCCATT CCTCGAGTCC CGGCTGCTGC AGGTGGAGGG CATCCTGGAG
TCCTCCGGCG AGGTGCGCCA CGTCATCGCC GGGCGCCTGC ATGACCTGAG CCCTCTACTC
ACCGGCCTGG ACGTCCGCAG CCGGGATTTC CATTGA
|
|---|
| Protein sequence | MAAWLVRMSA YAELHCLSNF SFQRGASSAA ELFARAARLG YRALAITDEC SLAGIVRAWQ
AAREHQVQLI VGSEIRLEQG PKLVLLAEDL EGYQNLCRLI TRGRRQADKG HYRLLREDLQ
QPLAGLLAIW LPNDHEDEQA AWLRERFPQR LWLGVELHRG ADDDARLDKL LALASHLRLP
PVACGDVHMH ARGRRALQDC MTAIRNHLPV SEAGAYLFPN GERHLRTLEA LQGIYPQALL
AETLKIAERC RFDLEQLKYQ YPRELVPAGH DPASWLRHLT EQGIARRWPN GASAKVRKQI
ERELELIAEL GYESYFLTVQ DIVAFARGRE ILCQGRGSAA NSAVCFALGI TELDPDRTNL
LFERFLSRER NEPPDIDVDF EHERREEVIQ YVFTRYGRQR AALTAVVSTY HGAGAVRDVA
KALGLPPEQV DVLANCCGRW SDQAPSAERL EEAGFDPQSP ILRRVLALTG ELIGFPRHLS
QHPGGFVISE QPLDTLVPVE NASMAERTVI QWDKDDLDAV GLLKVDVLAL GMLSALRRSF
DLIHALRGGK RLSIASIPSE DPATYEMISR ADTIGVFQIE SRAQMAMLPR LRPQKFYDLV
IQVAIVRPGP IQGDMVHPYL RRRNGEEPVA YPSAELEEVF ERTLGVPLFQ EQVMELAIVA
ADYTPGEADE LRRSMAAWKR HGGLEHHRER LTRGMLANGY EADFAARIFE QIKGFGSYGF
PESHAASFAL LTYASSWLKR HEPAAFACAL INSWPMGFYS PDQLLQDARR HALQTRPVDV
RHSGWDCSLE PFGQAQPAIR LGLRMIRGFR EEDARRIEQV REAQPFLDVH DLGRRARLDA
RALELLADAG ALRGLAGHRH KARWAVASVE PQLPLFAEGT VIEESTVSLP LPSRGEELLS
DYALLGTTLG PHPLKLLRGQ LKARRCRDSR ELAKLGHGRP IRVAGLVVGR QRPQTASGIT
FITLEDEFGM VNVVVRHDLA ERQRRPFLES RLLQVEGILE SSGEVRHVIA GRLHDLSPLL
TGLDVRSRDF H
|
|---|
| |