Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_55550 |
Symbol | |
ID | 4384923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4943865 |
End bp | 4944410 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639327061 |
Product | ECF subfamily RNA polymerase sigma-70 factor |
Protein accession | YP_792619 |
Protein GI | 116048582 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.0813524 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATT CGCGGCAAAG CGCGATGGTG AAGCTGTTCC TCGCCTCCTA CGACGACTTC AAGGCGCGCC TGAAACGGCG CCTGGGCTCC GAGGATCTGG CGTGCGACGT GCTGCACGAA ACCTACCTGA GAGTCGACCG GCTGGATGAT GCGTTGGAGG TCAAGAAGCC TCAGGCCTAC CTGTTCCGTA TTGCCCTGAA CATTGCCGCC GACCGCCGCG AGGGCGACGC CCGCCTGCTC ACCGGGGAGG AGGTGGCGGA GCTGTTGCAG GTGGCCGACG AAGGCCTCGA CCCGGAGCGC ATCGTCGGCG GTCATGCCGA GATCCGTCGC CTGTTGGAGG CGCTCTGCGA ACTGCCGGCG CGGCGTCGGC AGATTCTCAT CGCCTCGCGC CTGGAAGAGA CGCCGCATGC GGAAATCTCC CGTCGCTTCG GCATTTCCAC CCGCACCGTG GAGAAGGAAC TCAAGGCCGC CCTGTGGTTC TGCGCGGAGC GCCTGGAAAG AAAAGTCATC CAGAGGTTCG GTCCCGGGGC CGGAAAACCG TCATAA
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Protein sequence | MSDSRQSAMV KLFLASYDDF KARLKRRLGS EDLACDVLHE TYLRVDRLDD ALEVKKPQAY LFRIALNIAA DRREGDARLL TGEEVAELLQ VADEGLDPER IVGGHAEIRR LLEALCELPA RRRQILIASR LEETPHAEIS RRFGISTRTV EKELKAALWF CAERLERKVI QRFGPGAGKP S
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