Gene PA14_55540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_55540 
Symbol 
ID4384924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4942836 
End bp4943795 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content70% 
IMG OID639327060 
Producttransmembrane sensor 
Protein accessionYP_792618 
Protein GI116048583 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0301883 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCCT CAGACTCCGC CGCCGATGAA ACCGGCGACC TTCGCCACGA AGCGCACGCC 
TGGGTGATCA GCCTGACCTC CGGACGCGTC ACCCAGGGCG ACGCGCGGGC CTTCCGCCAG
TGGTGTGCGC GCAGCCCGCA ACACCTGCGA GCGTTCGTCG AGGCGCGCGA TCTCTGGCAG
GCACTCGGCA GTGCCGCCGC TCTGCCGCTG GAGTCGCCGG CTGTGGCGCA GATCGCGCCG
AGGCGTTTCG GTCGTCGCTG GTTCGTCGGC GGTGCGCTGG CCGCCTCGGT GGCGTTGTTC
GTCTTGCGCC CGTCGCTGCT CGACCATGGC CTGGGCGGCG CCGACTACGT CACGGCGGTC
GGCGAGCAAC GCCAGGTGCA GGTGAGCGGC GAGACGCGGA TCGAGATGAA CACCCGCACC
CGCCTGAATG TGCGGCGCAA TCAAGAGCAG CAGGAAACCA TCGAACTGCT CGGCGGCGAG
GCCGAGATCA TCGCCAGCCA CCCGCCGCAG AGCAGCCTGC GGGTGATGGC CGGGAGCGCC
TGGCTGAGCG CCAGCCGGGC CCGCTTCAAC GTGCGCAGCA GCGGTGACGT CTGCGTGGTG
ACCTGCCTGG AGGGCAGCGT GCGGCTCGAA CACCTCGGCC AGCGCCTGGA CCTCCAGGCC
GGCCAGCAGC TGACCTTCGA CGAGCGACGC AACGGTCCGC CGGTGCCTTT CGACGTTGCC
GAGGTGATGG CCTGGCGCGA GCGCATGCTG GTGTTCAACG ACGTACCGTT GGCCACGGTG
ATCGACGAAA TCAACCGCTA CCGTCCCGGC ATGCTCCTGC TGCTGGACAA GGCCCTTGGC
CGACGCCGGG TCCAGGCCCG TTTCAGCCTC GATCAACTGG CCGACGTGGC GACCCTGATC
CGCGATGCCT ATGGCATCGA GGTCACCCGC CTGCCGGGCG GGGTGGTGCT GCTCGGCTGA
 
Protein sequence
MTASDSAADE TGDLRHEAHA WVISLTSGRV TQGDARAFRQ WCARSPQHLR AFVEARDLWQ 
ALGSAAALPL ESPAVAQIAP RRFGRRWFVG GALAASVALF VLRPSLLDHG LGGADYVTAV
GEQRQVQVSG ETRIEMNTRT RLNVRRNQEQ QETIELLGGE AEIIASHPPQ SSLRVMAGSA
WLSASRARFN VRSSGDVCVV TCLEGSVRLE HLGQRLDLQA GQQLTFDERR NGPPVPFDVA
EVMAWRERML VFNDVPLATV IDEINRYRPG MLLLLDKALG RRRVQARFSL DQLADVATLI
RDAYGIEVTR LPGGVVLLG