| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_55440 |
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| Symbol | |
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| ID | 4382533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4933538 |
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| End bp | 4934947 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639327050 |
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| Product | putative type II secretion system protein |
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| Protein accession | YP_792608 |
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| Protein GI | 116048593 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000766086 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.021503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGC TGCCCTACGC CTGGGCCAAG GCGCAGCGCG CCTTGCTGCG GCCGGGCGAG
CATGGCGCGA CCCTGCTGGT CAGCCCGCGC ACGCCCGGCT GGGCGATCAG CGAGGTGCGC
CAGCGGCATG AGTTGGCCAG CCTGGAGAGC GTCCGCGACG ACGAACTCGA CACCCTGCTG
GCCAGCGCCT ACTCCGATAC CGGCAGCGCC GCGGCGGTGG TCGGCGCGGC GGAGAGCGAG
GTCGACCTCG ACCGCCTGAT GGACGATATC CCCGAGGTCA CTGACCTGCT CGACACCCAG
GATGGCGCGC CAGTGATCCG CATGATCAAC GCGCTGCTGA CCCAGGCGGC GCGCGATGAG
GCCAGCGACA TCCACATCGA GCCCTTCGAG ACCCATTCGG TGGTGCGCTA CCGCGTCGAC
GGCGCCCTGC GCGACGTGGT CGCGCCGCGC AAGGCGCTGC ACGCGGCGCT GGTGTCGCGG
ATCAAGATCA TGGCGCAGCT GGATATCGCC GAGAAACGCC TGCCCCAGGA TGGCCGCATC
GCCTTGCGGG TAGCCGGGCG GCCGATCGAC ATTCGCGTCT CCACCGTGCC CACCGGCCAC
GGCGAACGGG TGGTGATGCG CCTGCTGGAC AAGCAGGCCG GGCGCCTGAG GCTGGAGACC
CTGGGCATGG CCCCGGGCGT GCTGGCGCCG CTGGACAACC TGATCCGCCA GCCGCACGGC
ATCGTGCTGG TCACCGGGCC CACCGGCAGC GGCAAGACCA CCACCCTCTA CGCCGCCCTG
GCGCGGCTCG ACGCCAGCAC CAGCAACATC CTCACCGTCG AGGACCCGGT GGAGTACGAT
CTGCCGGGGA TCAGCCAGAT CCAGGTCAAC GCGCGCATCG ACATGACCTT CGCCGTAGCC
CTGCGGGCGA TCCTCCGGCA GGACCCGGAC ATCATCATGA TCGGCGAGAT CCGCGACCTG
GAGACCGCGC AGATCGCCGT GCAGGCCTCG CTCACCGGAC ACCTGGTGCT GGCCACGCTG
CACACCAACG ACGCGGTGTC GGCAGTGACG CGGCTGGTGG ACATGGGCGT CGAGCCGTTC
CTGCTCGCCT CGTCGATGCT TGGCGTACTC GCCCAGCGCC TGGTGCGGCG CCTGTGCACG
CATTGCCGGG TCGAAGAGGA CGGCGGCTGG CGCGCGGTCG GCTGCCCGGC CTGCAACCAG
ACCGGCTACA GCGGGCGCAC CGGCATCCAC GAGCTGTTCG TGATCGACGA CGAGATCCGC
CGCCTGGTTC ACCAGGGCCG CGCCGAGCAG GATCTCCGCG AAGCCGCCCG CGCCGCCGGC
ATGCGCAGCA TGCGCGAGGA CGGCGAGCGC TGGATCGCCA GCGGCTCCAC CACCCTGGAG
GAAATCCTCC GCGTGACCCG GGACGCCTGA
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| Protein sequence | MSLLPYAWAK AQRALLRPGE HGATLLVSPR TPGWAISEVR QRHELASLES VRDDELDTLL
ASAYSDTGSA AAVVGAAESE VDLDRLMDDI PEVTDLLDTQ DGAPVIRMIN ALLTQAARDE
ASDIHIEPFE THSVVRYRVD GALRDVVAPR KALHAALVSR IKIMAQLDIA EKRLPQDGRI
ALRVAGRPID IRVSTVPTGH GERVVMRLLD KQAGRLRLET LGMAPGVLAP LDNLIRQPHG
IVLVTGPTGS GKTTTLYAAL ARLDASTSNI LTVEDPVEYD LPGISQIQVN ARIDMTFAVA
LRAILRQDPD IIMIGEIRDL ETAQIAVQAS LTGHLVLATL HTNDAVSAVT RLVDMGVEPF
LLASSMLGVL AQRLVRRLCT HCRVEEDGGW RAVGCPACNQ TGYSGRTGIH ELFVIDDEIR
RLVHQGRAEQ DLREAARAAG MRSMREDGER WIASGSTTLE EILRVTRDA
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