Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_55180 |
Symbol | |
ID | 4384879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4901189 |
End bp | 4902088 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639327031 |
Product | glycosyl transferase |
Protein accession | YP_792589 |
Protein GI | 116048612 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.678126 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00000000000937683 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTGAAG AAGCCACTTC CAGCAAGCAC TCAGGCACGA CGGACGCCCC GCTGGTATCC GTCGTAGCGC CCTGCTTCAA CGCGGAAAAG TACCTGGAAG AAGCCCTGCG CAGCATCTAC GAGCAGGACT ACCCGAATTT CGAAGTGATC ATCGTCGACG ACGGTTCCAC CGACAACAGC TACGCCATGC TGGAGCAGTT GCAGAAAGTC CACGGTTTCC AGCTCTACCG CCAGCAGAAC CAGGGCGTCA GCGCAGCGCT GAACTTCGGT CTGCAACACG CCCGCGGCGA CTACGTAGCC ACGCCGGACC TGGACGACAT CATGCTGCCG CACTCGTTGA GCGTGCGCGC CGCGTACCTC GACCAGCACC CGGAGGTCGG CTGCGTCGGC GCCCTGGTGA TCTACATCGA CAGCGAAGGC CAGGAAACCA AGCGGCAGAA CGGCAATCGC ATCCGCCAGC TGGACTTCGA CTACTTGCTC GGCAACGCCT ACGTCTGCGG CGCCCCGATG TCCCTGTACC GCATGGAGGC CCTGCGCGCA GCCGGCTTCT ACGATCCCGA GATCAAGGTG CAGGACTTCC AGATGACCCT GCGCATCGCC AGCCAGGGCT ACCAGATCCA CAAGCTGCCG GTGCTGGTCA CCCGCTACCG GCGCCACCCC GACAACCTGT CGCGGCGCTA CAAGGTGCTG CTCGATGCCG ACCTGCGCAC CATCGCGCCC TACCAGTCGC ATCCCGCCTA CGAGCGCGGC CGCACGGAGT TGGTCAACAA GGCCCTGAAA TACGCCGTGG TCGCGGACAA GCGGCATGCC TGGCAACTGC TCCGCTCGCT GCCGCTGCGG CAGTGGAACC GTACCACCTT CCGCCGGTTG AAGCGCTTCC TTCTCCATCA CGAGAGCTGA
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Protein sequence | MIEEATSSKH SGTTDAPLVS VVAPCFNAEK YLEEALRSIY EQDYPNFEVI IVDDGSTDNS YAMLEQLQKV HGFQLYRQQN QGVSAALNFG LQHARGDYVA TPDLDDIMLP HSLSVRAAYL DQHPEVGCVG ALVIYIDSEG QETKRQNGNR IRQLDFDYLL GNAYVCGAPM SLYRMEALRA AGFYDPEIKV QDFQMTLRIA SQGYQIHKLP VLVTRYRRHP DNLSRRYKVL LDADLRTIAP YQSHPAYERG RTELVNKALK YAVVADKRHA WQLLRSLPLR QWNRTTFRRL KRFLLHHES
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