Gene PA14_55180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_55180 
Symbol 
ID4384879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4901189 
End bp4902088 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content64% 
IMG OID639327031 
Productglycosyl transferase 
Protein accessionYP_792589 
Protein GI116048612 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.678126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000000937683 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTGAAG AAGCCACTTC CAGCAAGCAC TCAGGCACGA CGGACGCCCC GCTGGTATCC 
GTCGTAGCGC CCTGCTTCAA CGCGGAAAAG TACCTGGAAG AAGCCCTGCG CAGCATCTAC
GAGCAGGACT ACCCGAATTT CGAAGTGATC ATCGTCGACG ACGGTTCCAC CGACAACAGC
TACGCCATGC TGGAGCAGTT GCAGAAAGTC CACGGTTTCC AGCTCTACCG CCAGCAGAAC
CAGGGCGTCA GCGCAGCGCT GAACTTCGGT CTGCAACACG CCCGCGGCGA CTACGTAGCC
ACGCCGGACC TGGACGACAT CATGCTGCCG CACTCGTTGA GCGTGCGCGC CGCGTACCTC
GACCAGCACC CGGAGGTCGG CTGCGTCGGC GCCCTGGTGA TCTACATCGA CAGCGAAGGC
CAGGAAACCA AGCGGCAGAA CGGCAATCGC ATCCGCCAGC TGGACTTCGA CTACTTGCTC
GGCAACGCCT ACGTCTGCGG CGCCCCGATG TCCCTGTACC GCATGGAGGC CCTGCGCGCA
GCCGGCTTCT ACGATCCCGA GATCAAGGTG CAGGACTTCC AGATGACCCT GCGCATCGCC
AGCCAGGGCT ACCAGATCCA CAAGCTGCCG GTGCTGGTCA CCCGCTACCG GCGCCACCCC
GACAACCTGT CGCGGCGCTA CAAGGTGCTG CTCGATGCCG ACCTGCGCAC CATCGCGCCC
TACCAGTCGC ATCCCGCCTA CGAGCGCGGC CGCACGGAGT TGGTCAACAA GGCCCTGAAA
TACGCCGTGG TCGCGGACAA GCGGCATGCC TGGCAACTGC TCCGCTCGCT GCCGCTGCGG
CAGTGGAACC GTACCACCTT CCGCCGGTTG AAGCGCTTCC TTCTCCATCA CGAGAGCTGA
 
Protein sequence
MIEEATSSKH SGTTDAPLVS VVAPCFNAEK YLEEALRSIY EQDYPNFEVI IVDDGSTDNS 
YAMLEQLQKV HGFQLYRQQN QGVSAALNFG LQHARGDYVA TPDLDDIMLP HSLSVRAAYL
DQHPEVGCVG ALVIYIDSEG QETKRQNGNR IRQLDFDYLL GNAYVCGAPM SLYRMEALRA
AGFYDPEIKV QDFQMTLRIA SQGYQIHKLP VLVTRYRRHP DNLSRRYKVL LDADLRTIAP
YQSHPAYERG RTELVNKALK YAVVADKRHA WQLLRSLPLR QWNRTTFRRL KRFLLHHES