Gene PA14_54870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_54870 
Symbol 
ID4380496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4861608 
End bp4862516 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content59% 
IMG OID639327002 
Producthypothetical protein 
Protein accessionYP_792560 
Protein GI116048640 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000873444 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value5.92488e-22 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGAAGGTG CAGCACACGA ATCGACAGCG TATTCCTCTC CCGCCGATGC CGACCATGGC 
ATGGTCACAC TGCAGCCCGG CTTGATCGTC TGCCATACGG TTGCAACCAG CCTTGGCGCT
GTCTCCACCA CCAAGACGTT CGACGGTGAC TGCGAGTTCA TTCACCTCAA CTGCCAACTG
GCCGGAAAGT TCACCGGACG GGTCGGCAGC CATCCTTTGG ATTTTTCCCA AGGAGACGTC
TCGCTTGGTT TTTCGGCTGG CGAACGGTTC CAAATCCAGC ATTGCGACCG GTTTGAGAAC
CTGACGGTGA TGGTCACGCC AGACGTGCTA TGTGAGTTGG CGGGGGAAGA AGTGCGCCCC
ATGCTCGGCC CCGAAGGCAA TCCTGGATTC TTCGTCCGGT ATGCGGGACT CTGCCGAAAA
TCGATTCGTT CTGCCAAAAG CGTTGCCAGC CTACTGGCCA CGGCTCCGTG TCAGCGCCTC
CTGCTTCACG CTGCAACCCT CGACTTCCTG CATTGGCATC TCGCCGCGTT CCGCAACTGC
GAAGACTGCA GGCGACTCTC CGTGCGCGAA TGTCGGCAGC TGGAAAACGC CCGGGCACTG
CTGCTGCAGG ATCTCAGCAC CCCTCCAACC ATTGCCGAAC TCGCGAAAGC CGTCGGCATG
AACCAATGCA AGCTAAAGAA GTGCTTCAAA GACCACTTCG GCAGCACCAT CTACGCCTTG
TTTCAAGAGC AGCGGATGAG CAGCGCTCAG CAGCTGCTGC AGAGCTACAA CGTGACCGAG
ACGGCAATGA TGCTTGGCTA CTCCAACGTC AGCCACTTCA GCGCCGCCTT CGCCAAGCAG
TTTGGTAACT TGCCGAGCAA GGCGCGCCAG AGCGTCACAG TAGCTGTTCG GGGCTATCAT
CCCGTCTAA
 
Protein sequence
MEGAAHESTA YSSPADADHG MVTLQPGLIV CHTVATSLGA VSTTKTFDGD CEFIHLNCQL 
AGKFTGRVGS HPLDFSQGDV SLGFSAGERF QIQHCDRFEN LTVMVTPDVL CELAGEEVRP
MLGPEGNPGF FVRYAGLCRK SIRSAKSVAS LLATAPCQRL LLHAATLDFL HWHLAAFRNC
EDCRRLSVRE CRQLENARAL LLQDLSTPPT IAELAKAVGM NQCKLKKCFK DHFGSTIYAL
FQEQRMSSAQ QLLQSYNVTE TAMMLGYSNV SHFSAAFAKQ FGNLPSKARQ SVTVAVRGYH
PV