Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_54870 |
Symbol | |
ID | 4380496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4861608 |
End bp | 4862516 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639327002 |
Product | hypothetical protein |
Protein accession | YP_792560 |
Protein GI | 116048640 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000000000873444 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 5.92488e-22 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGGAAGGTG CAGCACACGA ATCGACAGCG TATTCCTCTC CCGCCGATGC CGACCATGGC ATGGTCACAC TGCAGCCCGG CTTGATCGTC TGCCATACGG TTGCAACCAG CCTTGGCGCT GTCTCCACCA CCAAGACGTT CGACGGTGAC TGCGAGTTCA TTCACCTCAA CTGCCAACTG GCCGGAAAGT TCACCGGACG GGTCGGCAGC CATCCTTTGG ATTTTTCCCA AGGAGACGTC TCGCTTGGTT TTTCGGCTGG CGAACGGTTC CAAATCCAGC ATTGCGACCG GTTTGAGAAC CTGACGGTGA TGGTCACGCC AGACGTGCTA TGTGAGTTGG CGGGGGAAGA AGTGCGCCCC ATGCTCGGCC CCGAAGGCAA TCCTGGATTC TTCGTCCGGT ATGCGGGACT CTGCCGAAAA TCGATTCGTT CTGCCAAAAG CGTTGCCAGC CTACTGGCCA CGGCTCCGTG TCAGCGCCTC CTGCTTCACG CTGCAACCCT CGACTTCCTG CATTGGCATC TCGCCGCGTT CCGCAACTGC GAAGACTGCA GGCGACTCTC CGTGCGCGAA TGTCGGCAGC TGGAAAACGC CCGGGCACTG CTGCTGCAGG ATCTCAGCAC CCCTCCAACC ATTGCCGAAC TCGCGAAAGC CGTCGGCATG AACCAATGCA AGCTAAAGAA GTGCTTCAAA GACCACTTCG GCAGCACCAT CTACGCCTTG TTTCAAGAGC AGCGGATGAG CAGCGCTCAG CAGCTGCTGC AGAGCTACAA CGTGACCGAG ACGGCAATGA TGCTTGGCTA CTCCAACGTC AGCCACTTCA GCGCCGCCTT CGCCAAGCAG TTTGGTAACT TGCCGAGCAA GGCGCGCCAG AGCGTCACAG TAGCTGTTCG GGGCTATCAT CCCGTCTAA
|
Protein sequence | MEGAAHESTA YSSPADADHG MVTLQPGLIV CHTVATSLGA VSTTKTFDGD CEFIHLNCQL AGKFTGRVGS HPLDFSQGDV SLGFSAGERF QIQHCDRFEN LTVMVTPDVL CELAGEEVRP MLGPEGNPGF FVRYAGLCRK SIRSAKSVAS LLATAPCQRL LLHAATLDFL HWHLAAFRNC EDCRRLSVRE CRQLENARAL LLQDLSTPPT IAELAKAVGM NQCKLKKCFK DHFGSTIYAL FQEQRMSSAQ QLLQSYNVTE TAMMLGYSNV SHFSAAFAKQ FGNLPSKARQ SVTVAVRGYH PV
|
| |