Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_54630 |
Symbol | |
ID | 4385293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4843462 |
End bp | 4844625 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639326980 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_792539 |
Protein GI | 116048661 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.00169112 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGATTTCG ACCTCACCGA AGAACAACGC CTGCTGGTGG AGAGCGCCCG CGCCTTCGCC CGCCACGAAC TGGCGCCGAA GGCGGCCGAC TGGGACCGCG ACCATCACTT CCCGGTGGAA GTCCTCCGCG CCGCCGCCGA ACAGGGCTAC CTCGGCCTGT ACATCGCCGA GGAAGACGGC GGCCTGGGCC TGTCGCGGCT GTCCACTTCG CTGATCTTCG AGCAACTGGC CGCCGGCTGC GTGGCCACTA CCGCCTACAT CAGCATCCAC AACATGGCCG CCTGGATGCT CGCCTCGTTC GGCGACGCGG CGCTGAAGGA GGCCTGGCTG CCCGGCCTGA TCGGCGGCGA GTCGCTCGCC TCCTATTGCC TGACCGAGCC CGATGCCGGC TCCGACGCCG CGCGCCTGCG CACCCGCGCC CGCCGCGAGG GCGACGAATA CGTGCTGGAC GGCAGCAAGT GCTTCATTTC CGGCGCCGGC AGCACCCAGG TGCTGATCGT CATGGCGCGC ACCGGCGAGG ACGGCGCCAG GGGCATCTCC TGCTTCCTGG TGCCGGCCGA CGCGCCCGGC ATCCGCTACG GCCGCAACGA GGACAAGATG GGCTGGCGCG CGCAGCCGAC CCGCACCATC ACCTTCGAAG GCGTGCGCAT CCCCGCCGGC AACCGCATCG GCCCGGAGGG CCAGGGCTTC GTCTATGCCA TGAAAGGCCT CGACGGCGGC CGCCTGAACA TCGCCAGTTG TTCCCTGGGC GCCGCCCAGG CGGCGCTGGA GCAGTCGATG CGCTACGTCG AGGAGCGCGA GCAGTTCGGC AAGCCGCTGG CGACCTTCCA GGCCTTGCAG TTCAAGCTCG CCGACATGCT CACCGAACTC ACCGCCAGCC GCCAGATGGT CCGCCTCGGC GCCCATCGGC TGGACCGCGG CGACGCCGAG GCGACCCTGT ACTGCGCAAT GGCCAAGCGC TTCGCCACCG ACCGCTGCTT CGATGTCTGC AACGAGGCCT TGCAACTGCA CGGCGGCTAC GGCTATCTCA ACGATTATCC GCTGGAGCGC TGGGTACGCG ACACCCGCGT GCACCAGATC CTCGAAGGCA CCAACGAAAT CATGCGGGTG ATCGTCGCCC GCCGCCTGCT GGAGCAGGGC GGCATGCTCG ATCGCCTGCT GTGA
|
Protein sequence | MDFDLTEEQR LLVESARAFA RHELAPKAAD WDRDHHFPVE VLRAAAEQGY LGLYIAEEDG GLGLSRLSTS LIFEQLAAGC VATTAYISIH NMAAWMLASF GDAALKEAWL PGLIGGESLA SYCLTEPDAG SDAARLRTRA RREGDEYVLD GSKCFISGAG STQVLIVMAR TGEDGARGIS CFLVPADAPG IRYGRNEDKM GWRAQPTRTI TFEGVRIPAG NRIGPEGQGF VYAMKGLDGG RLNIASCSLG AAQAALEQSM RYVEEREQFG KPLATFQALQ FKLADMLTEL TASRQMVRLG AHRLDRGDAE ATLYCAMAKR FATDRCFDVC NEALQLHGGY GYLNDYPLER WVRDTRVHQI LEGTNEIMRV IVARRLLEQG GMLDRLL
|
| |