Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_54600 |
Symbol | |
ID | 4385296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4840050 |
End bp | 4840871 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639326977 |
Product | hypothetical protein |
Protein accession | YP_792536 |
Protein GI | 116048664 |
COG category | [V] Defense mechanisms |
COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0220314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.0306544 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCAAAC CCCTATCGCT CTACCACCCC TGGCTCTACT GGCTGCGGGT CTGGCAACGA CGTCTCTGGC GGCACTGCCG CTGGCGTCTT GGCGGCCGTC GCTACGTGCG GCTGCCATCG GTCGACGAGC GCCTGCCGTA CCGCTACATC AAGCACACCT CGAAGTTGAT CCGCCGCCTC GGCGACAGCG ACCTCGCCCT GCAACGCAAC AAGGTGGTCA ACCTGCGCCT GGCGGTGGAC TGCATGAACG GCGTGCGCAT CGGCCCCGGC GAGTACTTCT CGTTCTGCCG GCTGGTCGGT CGGCCCAGCG CCCGGCGTGG CTTCGTCGAA GGTATGGAGT TGTCCTTCGG CGAGGCGCGC AGCGGAATCG GCGGCGGCAT CTGCCAACTG AGCAACCTGA TCCACTGGAT GGCCCTGCAT TCGCCGCTGC GCGTGGTGGA GCGGGCCAAC CACAGCTTCG ACCCGTTTCC CGACGAGGGA CGGATCCTGC CGTTCGGCTC GGGCGCGGCG ATCTTCTACA ACTTCATCGA CCTGGTGCTG CACAATCCGA CGGCGGATAC CTTCCAGTTG CGCTTCCATA TCGCCGCCCA CCAACTGGAA GGCGAACTGC TGTGCAGCGC GCCGCGCCCT GTGCGCTACC ACGTCTACGA GAGGGCCCAG CGTTTTGTCC GCGACGGCGA GGCAGTGCTG AGGCTCAACG AGATCTGGCG CGACATCCGG GAAAAGGGCC AGGCCGGCAC CCTGCTGGCC AGCGAGTGCC TGTACCGCAA CCGGGTGCGC GTGAAGTATC CGCTGGAAGA GGCCCGCCTG TCCCGAGATT GA
|
Protein sequence | MRKPLSLYHP WLYWLRVWQR RLWRHCRWRL GGRRYVRLPS VDERLPYRYI KHTSKLIRRL GDSDLALQRN KVVNLRLAVD CMNGVRIGPG EYFSFCRLVG RPSARRGFVE GMELSFGEAR SGIGGGICQL SNLIHWMALH SPLRVVERAN HSFDPFPDEG RILPFGSGAA IFYNFIDLVL HNPTADTFQL RFHIAAHQLE GELLCSAPRP VRYHVYERAQ RFVRDGEAVL RLNEIWRDIR EKGQAGTLLA SECLYRNRVR VKYPLEEARL SRD
|
| |