Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_53980 |
Symbol | |
ID | 4381660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4787257 |
End bp | 4788444 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639326930 |
Product | hypothetical protein |
Protein accession | YP_792489 |
Protein GI | 116048711 |
COG category | [S] Function unknown |
COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCCCC CCCCCCAGAT CCGCATCCCC GCCACCTACC TACGCGGCGG CACCAGCAAG GGCGTGTTCT TCCGCCTGGA AGACCTGCCG GAATCCTGCC GGGTCCCCGG CGAGGCGCGC GACCGGCTGT TCATGCGGGT GATCGGCAGT CCCGACCCCT ATGCCGCGCA CATCGACGGG ATGGGCGGCG CCACCTCCAG CACCAGCAAG TGCGTGATCC TCTCGAAGAG CAGCCAGCCG GGCCATGACG TCGACTACCT CTACGGCCAG GTCTCCATCG ACAAGCCCTT CGTCGACTGG AGCGGCAACT GCGGCAACCT CTCCACCGGG GCCGGCGCCT TCGCCCTGCA CGCCGGGCTG GTGGATCCGG CGCGGATACC GGAAAACGGC ATCTGCGAGG TGCGCATCTG GCAGGCCAAT ATCGGCAAGA CCATCATCGC CCACGTGCCG GTGAGCGGCG GCCAAGTCCA GGAAACCGGC GACTTCGAAC TGGACGGAGT GACCTTCCCG GCGGCCGAGA TCGTGCTGGA GTTCCTCGAC CCGTCCGACG ACGGCGAGGA CGGCGGCGCC ATGTTCCCCA CCGGCAACCT GGTGGACGAC CTGGAGGTGC CGGGGGTCGG CACCTTCAAG GCGACCATGA TCAACGCCGG GATTCCCACG GTGTTCGTCA ATGCCGAGGA GATCGGCTAC CGCGGCACCG AGCTGCGCGA AGAGATCAAC GGCGACCCGC AGCAACTGGC GCGCTTCGAA CGGATCCGCG TCGCCGGCGC CCTGCGCATG GGCCTGATCA AGACCCCCGA GGAAGCCGCG ACCCGCCAGC ACACGCCGAA GATCGCCTTC GTCGCCCCGC CCCGCGACTA CCGCACCGCC AGCGGCAAGC TGGTGGCGGC CGGCGATATC GACCTGCTGG TCCGCGCGCT GTCCATGGGC AAGCTGCACC ACGCGATGAT GGGTACCGCG GCGGTGGCCA TCGGCACCGC CGCGGCCATT CCCGGCACCC TGGTGAACCT CGCCGCCGGC GGCGGCGAAC GCAGCGCGGT ACGCTTCGGC CATCCCTCCG GCACCCTGCG AGTGGGCGCC GAGGCCAGCC AGGCGAACGG CGAATGGACG GTGACCAAGG CGATCATGAG CCGCAGCGCG CGAATCCTCA TGGAAGGCTG GGTGCGCGTA CCCGGCGAGG CCTTCTGA
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Protein sequence | MAPPPQIRIP ATYLRGGTSK GVFFRLEDLP ESCRVPGEAR DRLFMRVIGS PDPYAAHIDG MGGATSSTSK CVILSKSSQP GHDVDYLYGQ VSIDKPFVDW SGNCGNLSTG AGAFALHAGL VDPARIPENG ICEVRIWQAN IGKTIIAHVP VSGGQVQETG DFELDGVTFP AAEIVLEFLD PSDDGEDGGA MFPTGNLVDD LEVPGVGTFK ATMINAGIPT VFVNAEEIGY RGTELREEIN GDPQQLARFE RIRVAGALRM GLIKTPEEAA TRQHTPKIAF VAPPRDYRTA SGKLVAAGDI DLLVRALSMG KLHHAMMGTA AVAIGTAAAI PGTLVNLAAG GGERSAVRFG HPSGTLRVGA EASQANGEWT VTKAIMSRSA RILMEGWVRV PGEAF
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