Gene PA14_53980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_53980 
Symbol 
ID4381660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4787257 
End bp4788444 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content70% 
IMG OID639326930 
Producthypothetical protein 
Protein accessionYP_792489 
Protein GI116048711 
COG category[S] Function unknown 
COG ID[COG2828] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02334] probable AcnD-accessory protein PrpF 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCCC CCCCCCAGAT CCGCATCCCC GCCACCTACC TACGCGGCGG CACCAGCAAG 
GGCGTGTTCT TCCGCCTGGA AGACCTGCCG GAATCCTGCC GGGTCCCCGG CGAGGCGCGC
GACCGGCTGT TCATGCGGGT GATCGGCAGT CCCGACCCCT ATGCCGCGCA CATCGACGGG
ATGGGCGGCG CCACCTCCAG CACCAGCAAG TGCGTGATCC TCTCGAAGAG CAGCCAGCCG
GGCCATGACG TCGACTACCT CTACGGCCAG GTCTCCATCG ACAAGCCCTT CGTCGACTGG
AGCGGCAACT GCGGCAACCT CTCCACCGGG GCCGGCGCCT TCGCCCTGCA CGCCGGGCTG
GTGGATCCGG CGCGGATACC GGAAAACGGC ATCTGCGAGG TGCGCATCTG GCAGGCCAAT
ATCGGCAAGA CCATCATCGC CCACGTGCCG GTGAGCGGCG GCCAAGTCCA GGAAACCGGC
GACTTCGAAC TGGACGGAGT GACCTTCCCG GCGGCCGAGA TCGTGCTGGA GTTCCTCGAC
CCGTCCGACG ACGGCGAGGA CGGCGGCGCC ATGTTCCCCA CCGGCAACCT GGTGGACGAC
CTGGAGGTGC CGGGGGTCGG CACCTTCAAG GCGACCATGA TCAACGCCGG GATTCCCACG
GTGTTCGTCA ATGCCGAGGA GATCGGCTAC CGCGGCACCG AGCTGCGCGA AGAGATCAAC
GGCGACCCGC AGCAACTGGC GCGCTTCGAA CGGATCCGCG TCGCCGGCGC CCTGCGCATG
GGCCTGATCA AGACCCCCGA GGAAGCCGCG ACCCGCCAGC ACACGCCGAA GATCGCCTTC
GTCGCCCCGC CCCGCGACTA CCGCACCGCC AGCGGCAAGC TGGTGGCGGC CGGCGATATC
GACCTGCTGG TCCGCGCGCT GTCCATGGGC AAGCTGCACC ACGCGATGAT GGGTACCGCG
GCGGTGGCCA TCGGCACCGC CGCGGCCATT CCCGGCACCC TGGTGAACCT CGCCGCCGGC
GGCGGCGAAC GCAGCGCGGT ACGCTTCGGC CATCCCTCCG GCACCCTGCG AGTGGGCGCC
GAGGCCAGCC AGGCGAACGG CGAATGGACG GTGACCAAGG CGATCATGAG CCGCAGCGCG
CGAATCCTCA TGGAAGGCTG GGTGCGCGTA CCCGGCGAGG CCTTCTGA
 
Protein sequence
MAPPPQIRIP ATYLRGGTSK GVFFRLEDLP ESCRVPGEAR DRLFMRVIGS PDPYAAHIDG 
MGGATSSTSK CVILSKSSQP GHDVDYLYGQ VSIDKPFVDW SGNCGNLSTG AGAFALHAGL
VDPARIPENG ICEVRIWQAN IGKTIIAHVP VSGGQVQETG DFELDGVTFP AAEIVLEFLD
PSDDGEDGGA MFPTGNLVDD LEVPGVGTFK ATMINAGIPT VFVNAEEIGY RGTELREEIN
GDPQQLARFE RIRVAGALRM GLIKTPEEAA TRQHTPKIAF VAPPRDYRTA SGKLVAAGDI
DLLVRALSMG KLHHAMMGTA AVAIGTAAAI PGTLVNLAAG GGERSAVRFG HPSGTLRVGA
EASQANGEWT VTKAIMSRSA RILMEGWVRV PGEAF