Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_53970 |
Symbol | |
ID | 4381661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4784532 |
End bp | 4787138 |
Gene Length | 2607 bp |
Protein Length | 868 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639326929 |
Product | aconitate hydratase |
Protein accession | YP_792488 |
Protein GI | 116048712 |
COG category | [C] Energy production and conversion |
COG ID | [COG1048] Aconitase A |
TIGRFAM ID | [TIGR01341] aconitate hydratase 1 [TIGR02333] 2-methylisocitrate dehydratase, Fe/S-dependent |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAGCG CACACCGCAA ACCGCTCCCC GGCACCCGCC TGGACTACTT CGACGCCCGC GAGGCGGTCG AGGCGATCCA GCCCGGCGCC TACGCCAAGC TGCCCTATAC CTCCCGCGTG CTCGCCGAGA ACCTGGTGCG CCGTTGCGAC CCGGCGACCC TGGAGGCTTC GCTGCGCCAA CTGGTCGAGC GCAAGCGCGA CCTCGACTTC CCCTGGTACC CGGCGCGGGT GGTCTGCCAT GACATCCTCG GGCAGACCGC GCTGGTCGAC CTCGCCGGCC TGCGCGACGC CATCGCCGAC AAGGGCGGCG ACCCGGCCCA GGTCAACCCG GTGGTGCCGG TGCAACTGAT CGTCGACCAC TCGCTGGCGG TGGAATGCGG CGGCTACGAC CCCGAGGCCT TCGCCAAGAA CCGCGCCATC GAGGACCGCC GCAACGAGGA CCGCTTCCAC TTCATCGACT GGACCAAGCA GGCCTTCCGC AACGTCGACG TGATCCCGCC GGGCAACGGC ATCATGCACC AGATCAACCT GGAGAAAATG TCGCCGGTGA TCCAGGCGCG CGACGGCGTG GCCTTCCCCG ATACCTGCGT GGGCACCGAC AGCCATACCC CGCACGTCGA CGCCCTGGGC GTGATCGCCA TCGGCGTCGG CGGCCTGGAA GCGGAAAACG TGATGCTCGG CCGCGCCTCC TGGATGCGCC TGCCGGACAT CGTCGGCGTC GAGCTGAGCG GCCGTCGCCA GCCGGGCATC ACCGCCACCG ACGTGGTGCT GGCCCTGACC GAGTTCCTGC GCAAGCAGAA GGTGGTCGGC GCCTACCTGG AGTTCTACGG CGAAGGCGCC TCCAGCCTGA CCCTCGGCGA CCGCGCGACC ATCTCCAACA TGGCTCCGGA ATACGGCGCC ACTGCGGCGA TGTTCGCCAT CGACCAGCAG ACCATCGACT ACCTGCGCCT CACCGGCCGC GACGACGAGC AGGTCGCCCT GGTGGAGGCC TATGCGCGCA CCGCCGGACT CTGGGCCGAC AGCCTGGTCG ACGCCGAGTA CGAGCGGGTA CTGAAGTTCG ACCTGTCCAG CGTGGTGCGC AACATGGCCG GCCCGTCCAA TCCGCACGCC AGGGTCGCCA CCAGCGAACT GGCGGCGAAA GGCATCGCCG GCAACCTCGA GCGGGCCCGC GCCGAGGAAG CCGAGGGCCT GATGCCGGAC GGCGCGGTGA TCATCGCCGC GATCACCAGT TGCACCAACA CCAGCAACCC GCGCAACGTG ATCGCCGCCG GCCTGCTGGC GCGCAACGCC GACCGCCTCG GCCTGGTCCG CAAGCCATGG GTGAAGACCT CGCTGGCACC CGGCTCCAAG GTGGTCACCG AATACCTGCG CGAAGCCGGC CTGCTGCCGC ACCTGGAAGC CCTCGGCTTC GGCGTGGTGG CCTACGCCTG CACGTCCTGC AACGGCATGT CCGGCGCCCT CGACCCGGCG ATCCAGCAGG AGATCGTCGA GCGCGACCTG TACGCCACCG CGGTGCTCTC CGGCAACCGC AACTTCGACG GGCGCATCCA CCCCTACGCC AAGCAGGCCT TCCTCGCCTC GCCGCCGCTG GTGGTGGCCT ACGCCATCGC CGGGACCATC CGCTTCGACA TCGAGCGCGA CGTGCTCGGC GTGGTGGACG GCAAGGAGAT CCGCCTGAAG GACCTCTGGC CGAGCGACGA GGAGATCGAC GCAGTGGTCA GGGCGGCGGT GAAGCCCGAG CAGTTCCGCC AGGTCTACAT CCCGATGTTC GACATCACCC ACGGCGAGCG CGAGAAGGTC GACCCGCTCT ACGCCTGGCG CCCGACGAGC ACCTACATCC GCCGCCCGCC GTACTGGGAA GGCGCCCTCG CCGGCGAACG CACCCTGCGC GGCATGCGCC CGCTGGCGGT GCTGCCGGAC AACATCACCA CCGACCACCT GTCGCCGTCC AACGCGATCC TCGCCGACAG CGCGGCGGGC GAGTACCTGG CGAAAATGGG CCTGCCCGAG GAGGACTTCA ACTCCTACGC CACCCACCGC GGCGACCACC TCACCGCGCA ACGCGCGACC TTCGCCAACC CGAAGCTGTT CAACGAGATG GTGCGCAACG CCGACGGCAG CGTGAAGCAG GGTTCGCTGG CGCGGGTCGA GCCGGAAGGC AAGGTGATGC GCATGTGGGA AGCCATCGAG ACCTACATGG AGCGCAAGCA GCCGCTGATC ATCGTCGCCG GCGCCGACTA CGGGCAGGGT TCTTCGCGCG ACTGGGCGGC CAAGGGCGTG CGCCTGGCCG GGGTGGAGGC GATCGTCGCC GAGGGCTTCG AGCGCATCCA CCGCACCAAC CTGATCGGCA TGGGCGTGCT GCCGCTGGAG TTCAAGCCGG GCACCACCCG CCTGACCCTG GGGATCGACG GCAGCGAGAC CTTCGACGTG CTCGGCGCTC GCCGGCCGCG CGCCGACCTG ACCCTGGTCA TCCACCGGCG CGACGGGGAG CGGCTCGAAG TGCCGGTGAC CTGCCGCCTG GACAGCGACG AGGAAGTCTC CATCTACGAA GCCGGCGGCG TACTGCAACG CTTCGCCCAG GACTTCCTGG AGGCGGCCGG CGCCTGA
|
Protein sequence | MNSAHRKPLP GTRLDYFDAR EAVEAIQPGA YAKLPYTSRV LAENLVRRCD PATLEASLRQ LVERKRDLDF PWYPARVVCH DILGQTALVD LAGLRDAIAD KGGDPAQVNP VVPVQLIVDH SLAVECGGYD PEAFAKNRAI EDRRNEDRFH FIDWTKQAFR NVDVIPPGNG IMHQINLEKM SPVIQARDGV AFPDTCVGTD SHTPHVDALG VIAIGVGGLE AENVMLGRAS WMRLPDIVGV ELSGRRQPGI TATDVVLALT EFLRKQKVVG AYLEFYGEGA SSLTLGDRAT ISNMAPEYGA TAAMFAIDQQ TIDYLRLTGR DDEQVALVEA YARTAGLWAD SLVDAEYERV LKFDLSSVVR NMAGPSNPHA RVATSELAAK GIAGNLERAR AEEAEGLMPD GAVIIAAITS CTNTSNPRNV IAAGLLARNA DRLGLVRKPW VKTSLAPGSK VVTEYLREAG LLPHLEALGF GVVAYACTSC NGMSGALDPA IQQEIVERDL YATAVLSGNR NFDGRIHPYA KQAFLASPPL VVAYAIAGTI RFDIERDVLG VVDGKEIRLK DLWPSDEEID AVVRAAVKPE QFRQVYIPMF DITHGEREKV DPLYAWRPTS TYIRRPPYWE GALAGERTLR GMRPLAVLPD NITTDHLSPS NAILADSAAG EYLAKMGLPE EDFNSYATHR GDHLTAQRAT FANPKLFNEM VRNADGSVKQ GSLARVEPEG KVMRMWEAIE TYMERKQPLI IVAGADYGQG SSRDWAAKGV RLAGVEAIVA EGFERIHRTN LIGMGVLPLE FKPGTTRLTL GIDGSETFDV LGARRPRADL TLVIHRRDGE RLEVPVTCRL DSDEEVSIYE AGGVLQRFAQ DFLEAAGA
|
| |