Gene PA14_53920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_53920 
Symbol 
ID4381664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4781552 
End bp4782274 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content68% 
IMG OID639326926 
Producttranscriptional regulator 
Protein accessionYP_792485 
Protein GI116048715 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.531171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGA ACCCGCCCCC TCTCGAAATT GCCCATGACG ACGGCGAGAC CTTGTCGGAA 
CACGTCTTCC GCAAGATCCA GAGCGCCATC GTCAGCGGCG AGATCGCGCC GGGCAGCAAG
ATCTCCGAGC CGGAGCTGGC GCGCACCTAC GGCATCAGCC GCGGCCCGCT GCGCGAGGCG
ATCCACCGCC TGGAAGGCCT GCGCCTGCTG GTGCGGGTGC CGCATGTCGG GGCGCGGGTG
GTGTCGCTGA GCCACGCCGA GCTGATCGAA CTCTACGAGA TCCGCGAGTC CCTGGAAGGC
ATGGCCTGCC GACTGGCCGC CGAGCGCATG AGCCAGGCCG AGATCGACGA ACTGCGCCGG
GTGCTCGACA CCCACGAGCG CGACGAGGCG TTCCAGGCCG GGCGCGGCTA TTACCAGCAG
GAAGGCGACT ACGACTTCCA CTACCGGATC ATCCAGGGCA GCGGCAACGC CACCCTCACC
CGCATGCTCT GCGGCGAGCT CTACCAACTG GTGCGGATGT ACCGCATCCA GTACTCGACC
ACACCGAACC GGCCGCGCCA GGCCTTCGCC GAACACCACC GCATTCTCGA CGCCATCGCC
GACCGTGACG GCGAACTGGC CGAGCTGCTG ATGCGCCGCC ACATCAGTGC GTCGCGCCGC
AATATCGAGC GCCAGCTGGA ACCCCAGCCG GCGAAGCTCG CCTCCGCTTC CTCCACCGTC
TAA
 
Protein sequence
MTQNPPPLEI AHDDGETLSE HVFRKIQSAI VSGEIAPGSK ISEPELARTY GISRGPLREA 
IHRLEGLRLL VRVPHVGARV VSLSHAELIE LYEIRESLEG MACRLAAERM SQAEIDELRR
VLDTHERDEA FQAGRGYYQQ EGDYDFHYRI IQGSGNATLT RMLCGELYQL VRMYRIQYST
TPNRPRQAFA EHHRILDAIA DRDGELAELL MRRHISASRR NIERQLEPQP AKLASASSTV