Gene PA14_53820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_53820 
Symbol 
ID4381674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4771821 
End bp4772588 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content66% 
IMG OID639326916 
Producthypothetical protein 
Protein accessionYP_792475 
Protein GI116048725 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.476086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.719662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCA TCGACTACAA CAGCTATCGC ACCACTACCC CCTACGGCAA ACGCGTGCGC 
TTCCTGGTGC TGCACTACAC CGCGCTCGAC TTCGCCGCTT CGGTCAAGGC GCTGACCACC
GGCGCCGCCA GCGCCCACTA CCTGATCCCG GCGCCGCACG ACCCCAGCTA CAAGGCCGCC
GGCTTCAAGG GCCAGCGCAT CTTCAACCTG GTCGCCGAGG AAGACCGCGC CTGGCACGCC
GGCGTCAGCG GCTGGGCGCG CCGCGACAAC CTCAACGACA CTTCCATCGG CATCGAGATC
GTCAACCTCG CCCGCGACGA CGACGGCGTG TTCACCTTCC CCGACTACGA GCGCTCGCAG
ATCAACGCAC TCAAGCAACT GGCGAAGAAC ATCCTGCAGC GCTACCCGGA CATGACCCCG
AAGAACGTGG TCGGCCACTC CGATATCGCC GTCGGGCGCA AGTCCGACCC GGGTCCGAAG
CTGCCCTGGA AGGAACTCTA CGAGGCCGGT ATCGGCGCCT GGTATGACGA CGCCACCCGC
GATCGCTATC GCGAAGGCTT CGAGCGCGAC GGCTTGCCGC CGCGCGCCGA CCTGCTGGAG
GCGTTCCGCC TGTACGGCTA TGCGCTGCCG GCGACGGTCG ACGACGCCTA CTTCGCCAGC
CTGCTGCGCG CTTTCCAGAT GCATTTCCGC CCGGAGAACT ACGACGGCGC GCTGGATGTG
GAGACGGCGG CGATCCTCTA CGCTCTGAAC GAGAAATACC CGGCCTGA
 
Protein sequence
MLTIDYNSYR TTTPYGKRVR FLVLHYTALD FAASVKALTT GAASAHYLIP APHDPSYKAA 
GFKGQRIFNL VAEEDRAWHA GVSGWARRDN LNDTSIGIEI VNLARDDDGV FTFPDYERSQ
INALKQLAKN ILQRYPDMTP KNVVGHSDIA VGRKSDPGPK LPWKELYEAG IGAWYDDATR
DRYREGFERD GLPPRADLLE AFRLYGYALP ATVDDAYFAS LLRAFQMHFR PENYDGALDV
ETAAILYALN EKYPA