Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_52570 |
Symbol | rsmA |
ID | 4383136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4660393 |
End bp | 4660578 |
Gene Length | 186 bp |
Protein Length | 61 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639326812 |
Product | carbon storage regulator |
Protein accession | YP_792371 |
Protein GI | 116048829 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) |
TIGRFAM ID | [TIGR00202] carbon storage regulator (csrA) |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.0097749 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATTC TGACTCGTCG GGTCGGAGAG ACCCTGATGG TAGGTGACGA CGTCACCGTG ACGGTACTGG GTGTCAAAGG GAACCAGGTG CGCATCGGCG TCAACGCGCC GAAGGAAGTC GCCGTGCACC GGGAGGAAAT TTACCAGCGC ATCCAGAAAG AGAAAGATCA AGAGCCAAAC CATTAA
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Protein sequence | MLILTRRVGE TLMVGDDVTV TVLGVKGNQV RIGVNAPKEV AVHREEIYQR IQKEKDQEPN H
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