Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_52270 |
Symbol | ldhA |
ID | 4383099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4638585 |
End bp | 4639574 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639326786 |
Product | D-lactate dehydrogenase (fermentative) |
Protein accession | YP_792349 |
Protein GI | 116048850 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.339144 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATCC TGTTCTTCAG CAGCCAGGCC TACGACAGCG AGAGCTTCCA GGCCAGCAAC CACCGGCACG GCTTCGAACT GCACTTCCAG CAGGCCCACC TGCAGGCGGA CACGGCGGTC CTCGCCCAGG GCTTCGAAGT AGTCTGCGCC TTCGTCAACG ACGACCTCTC GCGGCCGGTG CTGGAACGCC TGGCCGCCGG CGGCACGCGC CTGGTCGCCC TGCGCTCGGC CGGCTACAAC CACGTCGACC TGGCCGCCGC CGAAGCGCTC GGCCTGCCGG TGGTGCACGT CCCGGCCTAT TCGCCGCACG CTGTCGCCGA GCACGCGGTC GGCCTGATCC TGACGCTCAA CCGGCGCCTG CACCGCGCCT ACAACCGGAC CCGCGAGGGC GATTTCTCGC TGCATGGGCT GACCGGCTTC GACCTCCACG GCAAACGCGT CGGAGTGATC GGCACCGGAC AGATCGGCGA GACCTTCGCC CGCATCATGG CCGGCTTCGG CTGCGAGCTG CTGGCCTACG ATCCCTATCC CAATCCGCGC ATCCAAGCGC TCGGCGGCCG CTACCTGGCG CTCGACGCCC TGCTCGCCGA GTCCGACATC GTCAGCCTGC ATTGCCCGCT GACCGCCGAC ACCCGCCACC TCATCGACGC GCAGCGCCTG GCGACGATGA AACCCGGCGC GATGCTGATC AATACCGGCC GTGGCGCCCT GGTGAACGCC GCGGCGCTGA TCGAGGCGCT GAAGAGCGGA CAACTGGGCT ACCTCGGCCT GGACGTCTAT GAAGAGGAAG CGGATATCTT CTTCGAGGAT CGCTCCGACC AGCCCCTGCA GGATGACGTG CTGGCACGCC TGCTGAGCTT CCCCAACGTG GTGGTGACCG CCCACCAGGC CTTCCTTACC CGCGAGGCGC TGGCGGCGAT CGCCGACACC ACCCTGGACA ACATCGCCGC CTGGCAGGAC GGGACGCCGC GCAATCGGGT CCGGGCCTGA
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Protein sequence | MRILFFSSQA YDSESFQASN HRHGFELHFQ QAHLQADTAV LAQGFEVVCA FVNDDLSRPV LERLAAGGTR LVALRSAGYN HVDLAAAEAL GLPVVHVPAY SPHAVAEHAV GLILTLNRRL HRAYNRTREG DFSLHGLTGF DLHGKRVGVI GTGQIGETFA RIMAGFGCEL LAYDPYPNPR IQALGGRYLA LDALLAESDI VSLHCPLTAD TRHLIDAQRL ATMKPGAMLI NTGRGALVNA AALIEALKSG QLGYLGLDVY EEEADIFFED RSDQPLQDDV LARLLSFPNV VVTAHQAFLT REALAAIADT TLDNIAAWQD GTPRNRVRA
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