| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_52210 |
|---|
| Symbol | cysM |
|---|
| ID | 4383104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 4629950 |
|---|
| End bp | 4630849 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639326781 |
|---|
| Product | cysteine synthase B |
|---|
| Protein accession | YP_792344 |
|---|
| Protein GI | 116048855 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | [TIGR01136] cysteine synthases
[TIGR01138] cysteine synthase B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.183215 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTGC AGTACCCGAC TATCGCCGAC TGCGTTGGCA ATACCCCTCT GGTGCGTCTG
CAGCGCCTTC CCGGGGAAAC CTCCAATACC CTGCTGGTGA AGCTCGAAGG CAACAACCCC
GCGGGATCGG TGAAGGACCG CCCGGCCCTG TCGATGATCA CCCGTGCCGA ACTGCGCGGC
GACATCCGCC CCGGCGATAC GCTGATCGAG GCTACTTCCG GCAACACCGG CATCGCCCTG
GCCATGGCGG CGGCGATCAA GGGTTACAAG ATGATCCTGA TCATGCCGGA CAACTCCACG
GCTGAACGCA AGGCGGCGAT GACCGCCTAT GGCGCCGAGC TTATTCTGGT CAGCAAGGAA
GAGGGCATGG AGGGCGCGCG CGATCTGGCC GACAAGCTGC AGCGCGAAGG CCGCGGCAAG
GTTCTCGACC AGTTCGCCAA TGGCGACAAC CCGGAAGCCC ATTACCACAG CACCGGCCCG
GAAATCTGGC AGCAGACCGG CGGCAGCATC ACCCATTTCG TCAGCTCCAT GGGCACCACC
GGGACCATCA TGGGCGTATC GCGCTACCTC AAGGAGCAGA ACCCGGCGGT GCAGATCGTC
GGCCTGCAAC CCATGGAGGG CTCGGCCATC CCGGGAATCC GACGCTGGCC GCAGGAATAC
CTGCCGAAGA TCTATGACGC CAGTCGCGTC GACCGGGTCG TCGACATGCA CCAGGACGAA
GCGGAGGACA TCATGCGCCG GCTGGCCCGC GAGGAAGGCA TCTTCTGCGG CGTGTCCTCC
GGCGGGGCGG TGGCGGCGAT GCTGCGCCTG TCCCGCGAAC TGGAGAATGC CGTGCTGGTG
GCGATCATCT GCGACCGCGG CGACCGCTAC CTGTCTTCCG GCGTCTATGA CCCGCGCTGA
|
|---|
| Protein sequence | MTVQYPTIAD CVGNTPLVRL QRLPGETSNT LLVKLEGNNP AGSVKDRPAL SMITRAELRG
DIRPGDTLIE ATSGNTGIAL AMAAAIKGYK MILIMPDNST AERKAAMTAY GAELILVSKE
EGMEGARDLA DKLQREGRGK VLDQFANGDN PEAHYHSTGP EIWQQTGGSI THFVSSMGTT
GTIMGVSRYL KEQNPAVQIV GLQPMEGSAI PGIRRWPQEY LPKIYDASRV DRVVDMHQDE
AEDIMRRLAR EEGIFCGVSS GGAVAAMLRL SRELENAVLV AIICDRGDRY LSSGVYDPR
|
|---|
| |