Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_51720 |
Symbol | tolB |
ID | 4384460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4594188 |
End bp | 4595486 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639326739 |
Product | translocation protein TolB |
Protein accession | YP_792302 |
Protein GI | 116048897 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000109745 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0000339249 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGTACCC TGATTCGCAT TGCGCTGTTC GCCCTGGCCC TGGTGGCAGG TGCTGCGCAG GCTGCCGACC CGCTGGTGAT CTCCAGCGGT AACGACCGTG CCATTCCCAT CGCCGTGGTG CCGTTCGGCT TCCAGGGGGG CAACGTGTTG CCGGAAGACA TGTCCAATAT CATCGGCAAC GACCTGCGCA ACTCCGGCTA CTTCGAGCCG CTGCCCCGGC AGAACATGAT CAGCCAGCCG GCGCAGGCCA GCGAAGTGAT CTTCCGTGAC TGGAAGGCAG TTGGCGTCAA CTACGTGATG GTCGGCAACA TCGTGCCTGC CGGCGGACGC CTGCAGGTGC AGTACGCATT GTTCGATGTC GGCACCGAGC AGCAGGTCCT GACCGGCAGC GTGACCGGCA GCACCGATCA GCTCCGCGAC ATGTCGCACT ACATCGCCGA CCAGTCGTTC GAGAAGCTCA CCGGTATCAA GGGCGCGTTC TCCACCAAGA TGCTCTATGT CACCGCCGAG CGTTTCTCGG TCGACAACAC CCGCTACACC TTGCAGCGCT CCGACTACGA CGGCGCCCGC CCGGTGACCC TGCTGCAGTC GCGCGAGCCC ATCGTGTCGC CGCGCTTCTC GCCCGATGGC CGCCGTATCG CCTATGTCTC CTTCGAACAG AAGCGCCCGC GTATCTTCAT CCAGTACGTC GATACTGGCC GTCGTGAGCA GATCACCAAT TTCGAGGGCC TGAATGGCGC TCCGGCATTC TCCCCTGACG GCAACCGCCT GGCCTTCGTC CTGTCGCGCG ACGGCAACCC GGAAATCTAC GTCATGGACC TTGGTAGCCG CGCCCTGCGC CGCCTGACCA ACAACCTGGC GATCGATACC GAACCCTTCT GGGGCAAGGA CGGCTCTACC CTGTACTTCA CCTCGGACCG TGGCGGCAAG CCGCAGATCT ACAAGATGAA CGTGAACAGC GGTGCCGTGG ACCGGGTAAC CTTCATCGGC AACTACAACG CCAACCCGAA ACTCTCGGCC GACGAGAAGA CCCTGGTAAT GGTTCACCGC CAGCAGGGCT ACACCAACTT CCAGATCGCC GCCCAGGACC TCCAGCGCGG CAATCTGCGG GTGCTGTCGA ACACCACTCT GGACGATTCG CCCACTGTTG CGCCCAATGG CACCATGCTA ATCTACGCCA CCCGCCAGCA GGACCGGGGC GTGCTGATGC TCGTATCCAT CAACGGACGC GTACGGATAC CTCTCCCTAC CGCTCAGGGC GATGTGCGCG AGCCTTCCTG GTCCCCTTAC CTGAACTGA
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Protein sequence | MSTLIRIALF ALALVAGAAQ AADPLVISSG NDRAIPIAVV PFGFQGGNVL PEDMSNIIGN DLRNSGYFEP LPRQNMISQP AQASEVIFRD WKAVGVNYVM VGNIVPAGGR LQVQYALFDV GTEQQVLTGS VTGSTDQLRD MSHYIADQSF EKLTGIKGAF STKMLYVTAE RFSVDNTRYT LQRSDYDGAR PVTLLQSREP IVSPRFSPDG RRIAYVSFEQ KRPRIFIQYV DTGRREQITN FEGLNGAPAF SPDGNRLAFV LSRDGNPEIY VMDLGSRALR RLTNNLAIDT EPFWGKDGST LYFTSDRGGK PQIYKMNVNS GAVDRVTFIG NYNANPKLSA DEKTLVMVHR QQGYTNFQIA AQDLQRGNLR VLSNTTLDDS PTVAPNGTML IYATRQQDRG VLMLVSINGR VRIPLPTAQG DVREPSWSPY LN
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