Gene PA14_51720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_51720 
SymboltolB 
ID4384460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4594188 
End bp4595486 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content63% 
IMG OID639326739 
Producttranslocation protein TolB 
Protein accessionYP_792302 
Protein GI116048897 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0823] Periplasmic component of the Tol biopolymer transport system 
TIGRFAM ID[TIGR02800] tol-pal system beta propeller repeat protein TolB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000109745 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0000339249 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGTACCC TGATTCGCAT TGCGCTGTTC GCCCTGGCCC TGGTGGCAGG TGCTGCGCAG 
GCTGCCGACC CGCTGGTGAT CTCCAGCGGT AACGACCGTG CCATTCCCAT CGCCGTGGTG
CCGTTCGGCT TCCAGGGGGG CAACGTGTTG CCGGAAGACA TGTCCAATAT CATCGGCAAC
GACCTGCGCA ACTCCGGCTA CTTCGAGCCG CTGCCCCGGC AGAACATGAT CAGCCAGCCG
GCGCAGGCCA GCGAAGTGAT CTTCCGTGAC TGGAAGGCAG TTGGCGTCAA CTACGTGATG
GTCGGCAACA TCGTGCCTGC CGGCGGACGC CTGCAGGTGC AGTACGCATT GTTCGATGTC
GGCACCGAGC AGCAGGTCCT GACCGGCAGC GTGACCGGCA GCACCGATCA GCTCCGCGAC
ATGTCGCACT ACATCGCCGA CCAGTCGTTC GAGAAGCTCA CCGGTATCAA GGGCGCGTTC
TCCACCAAGA TGCTCTATGT CACCGCCGAG CGTTTCTCGG TCGACAACAC CCGCTACACC
TTGCAGCGCT CCGACTACGA CGGCGCCCGC CCGGTGACCC TGCTGCAGTC GCGCGAGCCC
ATCGTGTCGC CGCGCTTCTC GCCCGATGGC CGCCGTATCG CCTATGTCTC CTTCGAACAG
AAGCGCCCGC GTATCTTCAT CCAGTACGTC GATACTGGCC GTCGTGAGCA GATCACCAAT
TTCGAGGGCC TGAATGGCGC TCCGGCATTC TCCCCTGACG GCAACCGCCT GGCCTTCGTC
CTGTCGCGCG ACGGCAACCC GGAAATCTAC GTCATGGACC TTGGTAGCCG CGCCCTGCGC
CGCCTGACCA ACAACCTGGC GATCGATACC GAACCCTTCT GGGGCAAGGA CGGCTCTACC
CTGTACTTCA CCTCGGACCG TGGCGGCAAG CCGCAGATCT ACAAGATGAA CGTGAACAGC
GGTGCCGTGG ACCGGGTAAC CTTCATCGGC AACTACAACG CCAACCCGAA ACTCTCGGCC
GACGAGAAGA CCCTGGTAAT GGTTCACCGC CAGCAGGGCT ACACCAACTT CCAGATCGCC
GCCCAGGACC TCCAGCGCGG CAATCTGCGG GTGCTGTCGA ACACCACTCT GGACGATTCG
CCCACTGTTG CGCCCAATGG CACCATGCTA ATCTACGCCA CCCGCCAGCA GGACCGGGGC
GTGCTGATGC TCGTATCCAT CAACGGACGC GTACGGATAC CTCTCCCTAC CGCTCAGGGC
GATGTGCGCG AGCCTTCCTG GTCCCCTTAC CTGAACTGA
 
Protein sequence
MSTLIRIALF ALALVAGAAQ AADPLVISSG NDRAIPIAVV PFGFQGGNVL PEDMSNIIGN 
DLRNSGYFEP LPRQNMISQP AQASEVIFRD WKAVGVNYVM VGNIVPAGGR LQVQYALFDV
GTEQQVLTGS VTGSTDQLRD MSHYIADQSF EKLTGIKGAF STKMLYVTAE RFSVDNTRYT
LQRSDYDGAR PVTLLQSREP IVSPRFSPDG RRIAYVSFEQ KRPRIFIQYV DTGRREQITN
FEGLNGAPAF SPDGNRLAFV LSRDGNPEIY VMDLGSRALR RLTNNLAIDT EPFWGKDGST
LYFTSDRGGK PQIYKMNVNS GAVDRVTFIG NYNANPKLSA DEKTLVMVHR QQGYTNFQIA
AQDLQRGNLR VLSNTTLDDS PTVAPNGTML IYATRQQDRG VLMLVSINGR VRIPLPTAQG
DVREPSWSPY LN