| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_51710 |
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| Symbol | oprL |
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| ID | 4384461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4593629 |
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| End bp | 4594135 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639326738 |
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| Product | peptidoglycan associated lipoprotein OprL precursor |
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| Protein accession | YP_792301 |
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| Protein GI | 116048898 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000000147686 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.00068918 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGAAATGC TGAAATTCGG CAAATTTGCT GCGCTGGCTC TGGCCATGGC TGTGGCTGTG
GGTTGCTCCT CCAAGGGCGG CGATGCTTCC GGTGAAGGTG CCAATGGCGG CGTCGACCCG
AACGCAGGCT ATGGCGCCAA CAGCGGTGCC GTTGACGGCA GCCTGAGCGA CGAAGCCGCT
CTGCGTGCGA TCACCACCTT CTACTTCGAG TACGACAGCT CCGACCTGAA GCCGGAAGCC
ATGCGCGCTC TGGACGTACA CGCGAAAGAC CTGAAAGGCA GCGGTCAGCG CGTAGTGCTG
GAAGGCCACA CCGACGAACG TGGCACCCGC GAGTACAACA TGGCTCTGGG CGAGCGTCGT
GCCAAGGCCG TTCAGCGCTA CCTGGTGCTG CAGGGCGTTT CGCCGGCCCA GCTGGAACTG
GTTTCCTACG GTAAAGAGCG TCCGGTCGCC ACCGGCCACG ACGAGCAGTC CTGGGCTCAG
AACCGTCGCG TCGAGCTGAA GAAGTAA
|
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| Protein sequence | MEMLKFGKFA ALALAMAVAV GCSSKGGDAS GEGANGGVDP NAGYGANSGA VDGSLSDEAA
LRAITTFYFE YDSSDLKPEA MRALDVHAKD LKGSGQRVVL EGHTDERGTR EYNMALGERR
AKAVQRYLVL QGVSPAQLEL VSYGKERPVA TGHDEQSWAQ NRRVELKK
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