| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_51390 |
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| Symbol | pqsD |
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| ID | 4379983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4566976 |
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| End bp | 4567989 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639326708 |
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| Product | 3-oxoacyl-(acyl carrier protein) synthase III |
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| Protein accession | YP_792272 |
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| Protein GI | 116048927 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
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| TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.000116987 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGTAATC CGATCCTGGC CGGGCTGGGT TTCAGCCTGC CGAAACGCCA GGTCAGCAAT
CATGACCTGG TAGGGCGCAT CAACACGTCG GATGAGTTCA TCGTTGAACG CACCGGCGTA
CGCACCCGCT ATCACGTCGA GCCGGAACAG GCGGTCAGCG CGCTGATGGT ACCGGCGGCG
CGCCAGGCCA TCGAGGCTGC CGGGCTGCTG CCGGAGGACA TCGACCTGTT GCTGGTGAAC
ACCCTGTCGC CGGACCACCA CGACCCGTCC CAGGCCTGCC TGATCCAGCC GCTGCTGGGC
CTGCGGCACA TCCCGGTGCT GGATATCCGG GCACAGTGCA GCGGGTTGCT GTACGGCTTG
CAGATGGCTC GCGGGCAGAT CCTCGCCGGG CTGGCACGGC ATGTCCTGGT GGTCTGCGGC
GAGGTGCTGT CCAAGCGCAT GGACTGTTCG GACCGCGGCC GCAACCTGTC GATCCTGCTC
GGCGACGGTG CCGGCGCGGT GGTGGTCAGC GCCGGCGAGA GTCTCGAAGA CGGACTGCTG
GACCTGCGCC TGGGCGCCGA CGGCAACTAC TTCGACCTGC TGATGACCGC GGCGCCGGGT
AGTGCCTCGC CGACCTTCCT CGATGAGAAC GTCCTGCGCG AGGGCGGGGG CGAGTTCCTC
ATGCGCGGCC GGCCGATGTT CGAGCATGCC AGCCAGACCC TGGTACGGAT CGCCGGCGAA
ATGCTCGTGG CCCATGAGCT GACCTTGGAC GACATCGACC ATGTGATCTG CCATCAACCG
AACCTGCGCA TCCTCGATGC GGTGCAGGAG CAACTGGGCA TTCCCCAGCA CAAGTTCGCG
GTGACCGTGG ATCGTCTGGG CAACATGGCT TCGGCCTCGA CCCCGGTCAC GCTGGCGATG
TTCTGGCCGG ACATCCAGCC CGGACAGCGG GTGCTGGTCC TGACCTACGG TTCCGGCGCG
ACCTGGGGCG CGGCGCTGTA CCGTAAACCT GAGGAGGTGA ACCGGCCATG TTGA
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| Protein sequence | MGNPILAGLG FSLPKRQVSN HDLVGRINTS DEFIVERTGV RTRYHVEPEQ AVSALMVPAA
RQAIEAAGLL PEDIDLLLVN TLSPDHHDPS QACLIQPLLG LRHIPVLDIR AQCSGLLYGL
QMARGQILAG LARHVLVVCG EVLSKRMDCS DRGRNLSILL GDGAGAVVVS AGESLEDGLL
DLRLGADGNY FDLLMTAAPG SASPTFLDEN VLREGGGEFL MRGRPMFEHA SQTLVRIAGE
MLVAHELTLD DIDHVICHQP NLRILDAVQE QLGIPQHKFA VTVDRLGNMA SASTPVTLAM
FWPDIQPGQR VLVLTYGSGA TWGAALYRKP EEVNRPC
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