| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_51270 |
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| Symbol | dapA |
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| ID | 4379994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4555802 |
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| End bp | 4556680 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639326697 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_792261 |
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| Protein GI | 116048938 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 66 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.000235612 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTGCGG GCAGTATGGT GGCACTGGTC ACCCCCTTCG ATGCTCAGGG TCGACTGGAC
TGGGACAGCC TCGCCAAGCT GGTGGACTTC CACTTGCAGG AAGGCACCAA CGCCATCGTC
GCCGTCGGCA CCACCGGTGA ATCGGCCACG CTGGACGTGG AAGAGCACAT CCAGGTGATC
CGTCGCGTGG TCGACCAGGT CAAGGGCCGC ATCCCGGTGA TCGCCGGCAC CGGCGCCAAC
TCCACCCGCG AGGCGGTGGC GCTGACCGAG GCCGCGAAAA GCGGCGGCGC CGACGCCTGC
CTGCTGGTGA CGCCGTACTA CAACAAGCCG ACCCAGGAAG GCATGTACCA GCACTTCCGC
CATATCGCCG AAGCCGTTGC GATCCCGCAG ATCCTCTACA ACGTGCCCGG GCGTACCTCC
TGTGACATGC TTCCGGAGAC CGTCGAGCGC CTGTCCAAGG TGCCGAACAT CATCGGCATC
AAGGAGGCCA CCGGCGACCT GCAACGCGCC AAGGAAGTCA TCGAGCGCGT CGGCAAGGAC
TTCCTCGTCT ATTCCGGCGA CGACGCCACT GCCGTCGAGC TGATGCTGCT GGGTGGCAAG
GGCAACATCT CGGTGACCGC CAACGTCGCG CCGCGCGCCA TGAGCGACCT GTGCGCCGCC
GCCATGCGCG GCGACGCCGC TGCCGCGCGC GCCATCAACG ACCGCCTGAT GCCGCTGCAC
AAGGCGTTGT TCATCGAATC CAACCCCATT CCGGTGAAGT GGGCCCTGCA TGAGATGGGT
CTGATCCCCG AGGGCATCCG CCTGCCCCTG ACCTGGCTCA GCCCGCGTTG CCACGAGCCG
CTGCGTCAGG CCATGCGCCA GACCGGCGTA TTGGCTTGA
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| Protein sequence | MIAGSMVALV TPFDAQGRLD WDSLAKLVDF HLQEGTNAIV AVGTTGESAT LDVEEHIQVI
RRVVDQVKGR IPVIAGTGAN STREAVALTE AAKSGGADAC LLVTPYYNKP TQEGMYQHFR
HIAEAVAIPQ ILYNVPGRTS CDMLPETVER LSKVPNIIGI KEATGDLQRA KEVIERVGKD
FLVYSGDDAT AVELMLLGGK GNISVTANVA PRAMSDLCAA AMRGDAAAAR AINDRLMPLH
KALFIESNPI PVKWALHEMG LIPEGIRLPL TWLSPRCHEP LRQAMRQTGV LA
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