Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_51080 |
Symbol | |
ID | 4380634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4539063 |
End bp | 4540049 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639326681 |
Product | putative dioxygenase |
Protein accession | YP_792246 |
Protein GI | 116048952 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0000000609604 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGGCGTGT TCAGGACCCG TTTCACCGAG ACCTTCGGCG TCGAACACCC GATCATGCAG GGCGGTATGC AGTGGGTCGG CCGTGCCGAG ATGGCTGCGG CGGTGGCCAA CGCCGGTGGC CTGGCGACGC TGTCGGCGTT GACCCAGCCG AGCCCGGAGG CACTGGCTGC GGAGATTGCA CGCTGCCGCG AGCTGACCGA TCGGCCGTTC GGGGTCAACC TGACCTTGCT GCCGACGCAG AAGCCGGTGC CCTATGCCGA ATATCGTGCA GCCATCATCG AGGCGGGAAT CCCCGTCGTC GAAACCGCCG GCAACGACCC CGGCGAGCAC ATCGCCGAAT TCCGTCGACA CGGCGTCAAG GTGATCCACA AGTGCACCGC CGTGCGCCAT GCGCTCAAGG CCGAGCGACT CGGTGTGGAC GCCGTCTCCA TCGACGGCTT CGAGTGTGCC GGCCACCCGG GCGAGGACGA CATCCCCGGC CTGGTGTTGC TGCCGGCCGC GGCCAACCGG CTACGCGTGC CGATCATCGC CTCCGGCGGT TTCGCCGATG GACGTGGCCT GGTCGCGGCG CTGGCGCTGG GTGCCGACGC GATCAACATG GGCACGCGCT TCCTGGCCAC TCGCGAATGT CCGATACACC CTGCGGTGAA GGCGGCGATC CGTGCGGCCG ACGAGCGTTC CACCGACCTG ATCATGCGTT CCCTGCGCAA TACCGCGCGG GTGGCGCGCA ACGCGATCAG CCAGGAAGTA CTGGCGATCG AGGCACGCGG CGGCGCCGGC TACGCCGATA TCGCCGCGCT GGTCAGCGGC CAGCGCGGTC GCCAGGTGTA CCAGCAGGGC GATACCGACC TGGGGATCTG GTCGGCCGGC ATGGTCCAGG GCCTGATCGA CGACGAACCG GCCTGCGCCG AGTTGCTCAG GGACATCGTC GAGCAGGCGC GCCAACTGGT GCGTCAACGC CTGGAGGGCA TGCTCGCCGG GGTCTGA
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Protein sequence | MGVFRTRFTE TFGVEHPIMQ GGMQWVGRAE MAAAVANAGG LATLSALTQP SPEALAAEIA RCRELTDRPF GVNLTLLPTQ KPVPYAEYRA AIIEAGIPVV ETAGNDPGEH IAEFRRHGVK VIHKCTAVRH ALKAERLGVD AVSIDGFECA GHPGEDDIPG LVLLPAAANR LRVPIIASGG FADGRGLVAA LALGADAINM GTRFLATREC PIHPAVKAAI RAADERSTDL IMRSLRNTAR VARNAISQEV LAIEARGGAG YADIAALVSG QRGRQVYQQG DTDLGIWSAG MVQGLIDDEP ACAELLRDIV EQARQLVRQR LEGMLAGV
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