Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_50940 |
Symbol | |
ID | 4385937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4526078 |
End bp | 4526572 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639326670 |
Product | hypothetical protein |
Protein accession | YP_792235 |
Protein GI | 116048963 |
COG category | [S] Function unknown |
COG ID | [COG5608] Conserved secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.30636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0000172849 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATTACC AGGCGCAAAT GATAAGAATT ATCAGCCTAA TAATGGCGTG GGGAGTTCTC TCCAATCTCT CGGGCTGCAG CTGGATGACC GGCAGCTTCG AAGACCCCGA CGTCAAGCTG CTGAAGGTGG AAGTGGTCAA GGCACGCTTG CTGGAACAGG AGTTCGTGAT GCGCTTCCGC ATCGACAACC CCAACGATTT CAGCCTGCCG GTACGCGGCC TGCAGTACGC CGTGCAACTG AACGACATCC AGCTCGCAGA AGGCGAGTCC GGCCAGTGGT TCACGGTTCC CGCCCACGGC CACGAGGTAT TCGACGTGCC GGTGCGAACC AATCTCTGGC GCCACATGAA ATACATCGTC AAGCTCCTTG AGCGTCCCGA GGAGCCGATC CGCTACCGCC TGCAGGGCGA AGTGAAGACC GGACTGATGT TCGGCCGCAG CGTGCACCTG AGACGAAATG GCGAGATAAT TCCCGGCGAT TTCATCCCAG AATAG
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Protein sequence | MNYQAQMIRI ISLIMAWGVL SNLSGCSWMT GSFEDPDVKL LKVEVVKARL LEQEFVMRFR IDNPNDFSLP VRGLQYAVQL NDIQLAEGES GQWFTVPAHG HEVFDVPVRT NLWRHMKYIV KLLERPEEPI RYRLQGEVKT GLMFGRSVHL RRNGEIIPGD FIPE
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