Gene PA14_50940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_50940 
Symbol 
ID4385937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4526078 
End bp4526572 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content58% 
IMG OID639326670 
Producthypothetical protein 
Protein accessionYP_792235 
Protein GI116048963 
COG category[S] Function unknown 
COG ID[COG5608] Conserved secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.30636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0000172849 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATTACC AGGCGCAAAT GATAAGAATT ATCAGCCTAA TAATGGCGTG GGGAGTTCTC 
TCCAATCTCT CGGGCTGCAG CTGGATGACC GGCAGCTTCG AAGACCCCGA CGTCAAGCTG
CTGAAGGTGG AAGTGGTCAA GGCACGCTTG CTGGAACAGG AGTTCGTGAT GCGCTTCCGC
ATCGACAACC CCAACGATTT CAGCCTGCCG GTACGCGGCC TGCAGTACGC CGTGCAACTG
AACGACATCC AGCTCGCAGA AGGCGAGTCC GGCCAGTGGT TCACGGTTCC CGCCCACGGC
CACGAGGTAT TCGACGTGCC GGTGCGAACC AATCTCTGGC GCCACATGAA ATACATCGTC
AAGCTCCTTG AGCGTCCCGA GGAGCCGATC CGCTACCGCC TGCAGGGCGA AGTGAAGACC
GGACTGATGT TCGGCCGCAG CGTGCACCTG AGACGAAATG GCGAGATAAT TCCCGGCGAT
TTCATCCCAG AATAG
 
Protein sequence
MNYQAQMIRI ISLIMAWGVL SNLSGCSWMT GSFEDPDVKL LKVEVVKARL LEQEFVMRFR 
IDNPNDFSLP VRGLQYAVQL NDIQLAEGES GQWFTVPAHG HEVFDVPVRT NLWRHMKYIV
KLLERPEEPI RYRLQGEVKT GLMFGRSVHL RRNGEIIPGD FIPE