| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_50800 |
|---|
| Symbol | pdxH |
|---|
| ID | 4385951 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 4512895 |
|---|
| End bp | 4513542 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639326656 |
|---|
| Product | pyridoxamine 5'-phosphate oxidase |
|---|
| Protein accession | YP_792221 |
|---|
| Protein GI | 116048977 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
|---|
| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.00587779 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGT CCCTGGCCGA TATGCGCCGC GAGTACACCC GCGATGGCCT CAGCGAGGCC
AACGCCCCTA GCGATCCCTT CAGCCTGTTC CGCCAGTGGT TCGACGACGC GGTGAAGACC
GAGCGCCTGC CGGTCGAACC CAACGCCATG ACCCTGGCCA CCGTCGACGC CGACGGCTAT
CCGCATTGCC GTATCCTCCT GCTCAAGGGC CTCGACGAGC GCGGCTTCAC CTTCTTCACC
AACTACGAAA GCGCCAAGGG CCGGCAACTG GCGGCCAATC CGCGGGCGGC CATGACCTTC
TTCTGGCCGG CGCTGGAGCG TCAGGTGCGC ATCGAAGGCA GCGTCGAGAA GGTCACTCCC
GAGGAATCCG ACGCCTACTA CCAGGTGCGT CCGCTGGGCA GTCGCCTGGG CGCCTGGGCC
TCGCCGCAGA GCCGGGTCAT CGCCGATCGC GCCGAGCTGG AACGGCTGCT CGCGGACACC
GAGCGGCGTT TCGCCGACCA GCCGCCGAGC TGTCCCGAGC ACTGGGGCGG CTACCGTCTC
CTGCCGCAGC GCATCGAGTT CTGGCAGGGG CGGCCGAGCC GCCTGCACGA CCGTCTCGAC
TATCGACGCC AGGACGGCGG CTGGTCGCGC GAACGCCTGG CGCCCTGA
|
|---|
| Protein sequence | MTQSLADMRR EYTRDGLSEA NAPSDPFSLF RQWFDDAVKT ERLPVEPNAM TLATVDADGY
PHCRILLLKG LDERGFTFFT NYESAKGRQL AANPRAAMTF FWPALERQVR IEGSVEKVTP
EESDAYYQVR PLGSRLGAWA SPQSRVIADR AELERLLADT ERRFADQPPS CPEHWGGYRL
LPQRIEFWQG RPSRLHDRLD YRRQDGGWSR ERLAP
|
|---|
| |