Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_49640 |
Symbol | |
ID | 4380109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4416801 |
End bp | 4417703 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639326560 |
Product | transcriptional regulator |
Protein accession | YP_792125 |
Protein GI | 116049073 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.097129 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA GTGAAAAATC GAATAGCCGC CTGTTCGACC TCGACCTGCT CCGCGCCATC GTCACGGTGG CCGACTGCGG CAGCTTCACC ACTGCCGCCG CGCGCCTGCA CTCGACCCAG TCGACCGTCA GCCAGAAGGT TCGCCGCCTG GAGGAAATGG CCGGACACCG CCTGCTGGAG CGCGGCAACC GCGACGTGTT GCCGACCGAC GCCGGCGATA CGCTGCTCGG CTACGCCCGT CGCCTGCTGG CGCTGAACGA CGAACTGGCC GAGGCGCTGT CCGGCGCCAC GGTGGCGCTG ACGGTGCGCA TCGGCGTGCC GGACGACTTC GCCGCCGGCC GCACCACCGA GCGACTGGCG GCCTTCAACC GGCGTTATCC ACAGGTCAAG CTGGAAGTCA CCAGCGGCAT GAGCCGCGAC CTCAGCGCCA GCTACGACCG CGGCGAACTG GACCTGGTGC TGCTCAAGCA GCGCCGCGCC AGCCGCGAGG CACTGGCCTG CTGGCCGGAA AAGACATGCT GGGTGGACAG CGCCAGGAAC CCCTGCATCG ACCTCGACCC ACTGCCCATC GTCACCTTCC CGCCGCGCGG GGTCTACCGC GACGAGATGA TCGCCGCCCT GGAAGCGGTC GGCCGGCGCT GGCACATCAG CTTCACCAGT TCCAGCCTCA GCGGCCTGCA ATCGGCCATC GCCGACGGCA TGGGTATAGG CCTGCTGCCG TTGCGCGCGG TGAGCGCAGG CCACGCGGTG CTGCCGAAGA ACGCCGGGCT GCCGGCGGTG GACGTGTTCG AAGTGGCGCT GCTGCACCGG CCGGCGGCGG ATCCGATGGT GAAGGCGCTG GCGCGCGTGC TGTCGCGGGT GCTGGCGGAA GATACCCGGA GCCGGCCCGC ATTCGAAAAA TGA
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Protein sequence | MSDSEKSNSR LFDLDLLRAI VTVADCGSFT TAAARLHSTQ STVSQKVRRL EEMAGHRLLE RGNRDVLPTD AGDTLLGYAR RLLALNDELA EALSGATVAL TVRIGVPDDF AAGRTTERLA AFNRRYPQVK LEVTSGMSRD LSASYDRGEL DLVLLKQRRA SREALACWPE KTCWVDSARN PCIDLDPLPI VTFPPRGVYR DEMIAALEAV GRRWHISFTS SSLSGLQSAI ADGMGIGLLP LRAVSAGHAV LPKNAGLPAV DVFEVALLHR PAADPMVKAL ARVLSRVLAE DTRSRPAFEK
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