Gene PA14_49640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_49640 
Symbol 
ID4380109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4416801 
End bp4417703 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content69% 
IMG OID639326560 
Producttranscriptional regulator 
Protein accessionYP_792125 
Protein GI116049073 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.097129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA GTGAAAAATC GAATAGCCGC CTGTTCGACC TCGACCTGCT CCGCGCCATC 
GTCACGGTGG CCGACTGCGG CAGCTTCACC ACTGCCGCCG CGCGCCTGCA CTCGACCCAG
TCGACCGTCA GCCAGAAGGT TCGCCGCCTG GAGGAAATGG CCGGACACCG CCTGCTGGAG
CGCGGCAACC GCGACGTGTT GCCGACCGAC GCCGGCGATA CGCTGCTCGG CTACGCCCGT
CGCCTGCTGG CGCTGAACGA CGAACTGGCC GAGGCGCTGT CCGGCGCCAC GGTGGCGCTG
ACGGTGCGCA TCGGCGTGCC GGACGACTTC GCCGCCGGCC GCACCACCGA GCGACTGGCG
GCCTTCAACC GGCGTTATCC ACAGGTCAAG CTGGAAGTCA CCAGCGGCAT GAGCCGCGAC
CTCAGCGCCA GCTACGACCG CGGCGAACTG GACCTGGTGC TGCTCAAGCA GCGCCGCGCC
AGCCGCGAGG CACTGGCCTG CTGGCCGGAA AAGACATGCT GGGTGGACAG CGCCAGGAAC
CCCTGCATCG ACCTCGACCC ACTGCCCATC GTCACCTTCC CGCCGCGCGG GGTCTACCGC
GACGAGATGA TCGCCGCCCT GGAAGCGGTC GGCCGGCGCT GGCACATCAG CTTCACCAGT
TCCAGCCTCA GCGGCCTGCA ATCGGCCATC GCCGACGGCA TGGGTATAGG CCTGCTGCCG
TTGCGCGCGG TGAGCGCAGG CCACGCGGTG CTGCCGAAGA ACGCCGGGCT GCCGGCGGTG
GACGTGTTCG AAGTGGCGCT GCTGCACCGG CCGGCGGCGG ATCCGATGGT GAAGGCGCTG
GCGCGCGTGC TGTCGCGGGT GCTGGCGGAA GATACCCGGA GCCGGCCCGC ATTCGAAAAA
TGA
 
Protein sequence
MSDSEKSNSR LFDLDLLRAI VTVADCGSFT TAAARLHSTQ STVSQKVRRL EEMAGHRLLE 
RGNRDVLPTD AGDTLLGYAR RLLALNDELA EALSGATVAL TVRIGVPDDF AAGRTTERLA
AFNRRYPQVK LEVTSGMSRD LSASYDRGEL DLVLLKQRRA SREALACWPE KTCWVDSARN
PCIDLDPLPI VTFPPRGVYR DEMIAALEAV GRRWHISFTS SSLSGLQSAI ADGMGIGLLP
LRAVSAGHAV LPKNAGLPAV DVFEVALLHR PAADPMVKAL ARVLSRVLAE DTRSRPAFEK