| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_49390 |
|---|
| Symbol | rrmA |
|---|
| ID | 4381691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 4389721 |
|---|
| End bp | 4390524 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639326540 |
|---|
| Product | rRNA methyltransferase |
|---|
| Protein accession | YP_792105 |
|---|
| Protein GI | 116049093 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.0600503 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.756715 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATCT GCCCGCTCTG CTCCGCCGCC CTGGGCGAGG TCGACAACGG CGTCGCCTGC
CCCGCCGGGC ACCGCTTCGA CCGCGCCCGC CAGGGCTACC TGAACCTGCT GCCGGTGCAG
CACAAGAAAA GCCTCGATCC GGGCGACAAC GCCGCCATGG TCGAGGCCCG TCGCCAGTTC
CTCGGCGCCG GCCACTACGC GCCGCTGGCC CGGCGCCTGG CCGAACTGGC CGTCGAACGC
GCGCCGCGAC GCTGGCTGGA TATCGGCTGC GGCGAGGGCT ACTACAGCGC CCGGCTCGGC
GAAGCCCTGG CCGGCGCCGA GGGCTACGCC CTGGATATCT CCCGCGAGGC GGTGAAACGC
GCCTGCCGCC GCGCGCCGCA GTTGTCCTGG CTGGTGGCGA GCATGGCCCG GCTGCCGCTG
GCCGACGCCA GTTGCGAGCT GATCGCCAGC GTGTTCAGCC CGATCGACTG GAACGAAGCC
GTGCGCGTCC TCGCCCCCGG CGGCGGCGTA CTGCGCCTGG GCCCGGCCAG CGCGCACCTG
CTGGAACTGC GCCAGCGGCT CTATGACGAC GTGCGCGACT ACGCCGACGA CAAGCACCTC
GCCGGCCTGC CCGCGCAACT GAGCCTGCGC CACACCGAGA CCCTCGAGTT CCGCCTGGCG
CTGGACAGCT ACGACGCGCG GGAAAACCTC CTGGCCATGA CCCCGCACGG CTGGCGGGTC
AACCCCGAGC GCCGCGCGCG AATCCTGGCC GAACCCTTCG AAGTCAGCGT GGCGGTGCGC
TACGATTGGC TGCAACGCGA CTGA
|
|---|
| Protein sequence | MLICPLCSAA LGEVDNGVAC PAGHRFDRAR QGYLNLLPVQ HKKSLDPGDN AAMVEARRQF
LGAGHYAPLA RRLAELAVER APRRWLDIGC GEGYYSARLG EALAGAEGYA LDISREAVKR
ACRRAPQLSW LVASMARLPL ADASCELIAS VFSPIDWNEA VRVLAPGGGV LRLGPASAHL
LELRQRLYDD VRDYADDKHL AGLPAQLSLR HTETLEFRLA LDSYDARENL LAMTPHGWRV
NPERRARILA EPFEVSVAVR YDWLQRD
|
|---|
| |