| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_49160 |
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| Symbol | |
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| ID | 4380129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4365841 |
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| End bp | 4369203 |
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| Gene Length | 3363 bp |
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| Protein Length | 1120 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639326520 |
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| Product | putative sensor protein |
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| Protein accession | YP_792085 |
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| Protein GI | 116049113 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3447] Predicted integral membrane sensor domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0000588584 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCAGTG GCAAAACCGA CGACAGGGGC TTGTGGGCGG GCATCCAGGC CGGTGTGCTG
TTCTTTCTCG CCGCCCTGGC CTGCATCTAC CTGTCGCGCC AGCCTGCCAC CATCGCGGCG
ATCTGGCTGC CCAACGCGAT CCTCACCGCC GCCCTGCTGC GCGCGCCGCT GCGCCAGTGG
CCGGCGATCC TGCTCTGCTC CGCCGTGGCC AACCTGGCGG CCAACCGCCT GTATGGCGAC
AGCCTGTGGA TGAGCGCGGC GTTCCTGCCG GCCAACCTGA GCGAAGCGAT CTTCGCCGCG
ATGCTGTTAC GCATCAACCG GGTGCGCGAG GACTTCGAGT TCAACCTGCA TTCGGCGGTT
CGCGTGCTCT GGGCCGGCGC GCTGATCCCG CCCTTGCTCG GTGCCTCGGT GGGCGCGGTG
CTGGTCAGCG TCTTCGGCAT GGGGCGTTTC CCGGAAATGT GGGCGCGCTG GTACGTGGGC
GATGCGATGG GCATGCTCGC GCTGCTGCCG TTGTGCATGG CCAGCAACCT GGCGGCCTGG
CGTCACGCTC TGTCGGGGCG GGCGGGAGTG GACAACGCGA TGCTCCTGCT GGTGACCCTG
GTGATCAGCT TCGTGGCCCT GACGCGCCTG CCCTACGCCT TCATCTACGT GCTCCTGCCG
CTGCTGGTGG CCGCCGCCAG CACCAGCGTG TTCGGCACCG CGCTGATCGG CTGCCTGAAC
ACCTGTTTCA TCGCCGTGCT GATCGCCCTC GGCGTGTTCG TCCCCGAGTC GTCCCAGCAG
CGTTTCGGCG AGCCGCTGCT GTACCTGCCG ATGGCCTTGA CCCTCATTCC CGCCTTCCTG
GTCTCGGTGA TCATGGAGCG CAGCCGCCGC GAGCAGCATC AGGTGGCCAT CGGCGAGGCG
CAGTTCCGCG GCGCCATGGA ATTCTCGGCG ATCGGCATGG CCCTGGTGTC GCTGGAGGGG
CGGCTGTTCA AGGTCAACGA GGCGCTGTGC CGGATGCTCG GCTATTCCGC CGAACGCTTG
GGCGAGCTGT CGTTCCAGGA GATCACCTAT GTGGACGACC TGGAACTGGA CCTCGACCTG
GTGCGCGACC TGCTCGCCGG GCGTATCAAC TCCTACCAGA TGGAGAAGCG CTACCTGCGC
CAGGACGGCG AAACCTTCTG GGCGCGCATC AGCGTGTCGC TGGTGCGCGA TGAGGAGGGA
GTCGCCCAGT ACTTCGTCAC CCAGGTGGAG GATATCGACA GTCGCAAGCG TGCCGAGCTG
GAGCGCGAGC GCCTCGCCGA ACGGATCAAG CTGGCCACCG ACGCCGGGCA GATCGGCATC
TGGGAGTGGG ACCTGGCGCG CAACCGCCTG CACTGGGATT TCCGCATGTT CGACCTGTAC
GGCATCCGCA GCGGTCCCGG GGAGACCACG GTGGAGCAGT GGAAGGCGAG CCTGCATGCC
GAGGATCACG ACCGCGTGCT GCGCGAGCTG GAGCGCGCCG TCAGCGGGTT GCAGAAATTC
GACTGCGAGT TCCGTATCGT CCGCCCCAAC CGCGAGGTTC GCCACCTGCG GGCGATCGCC
ACGCTGACGC GCGACGAGGA CAACCGTCCG GTGCGGATGA TCGGCATCAA CAGCGACATC
ACCGAGATCC GCACCCTGGC GGAAACCCTG CACGAGGAAA AGGAACGCTT GCAGGTGACC
CTGTATTCCA TCGGCGATGC CGTGTTGACC ACCGACGCCG GCGGCCGCGT GACCTTCATG
AACCCGGTGG CCGAGGCGAT GACCGGCTGG ACCTTGCAGG ACGCCATCGG CGCGCCCCAC
GAACTGGTCT TCAACGTGCT CGACAGCGAC ACCGGCGAGG CCCTGGAAAG CCCGGTGCGA
CGCTGCCTGC AGAACACCCG GGTGTTCTAC CTGGAGGACG GCGCCACGCT GATCAGCCGC
AAGGGCGAGC AGCACGATAT CCAGAATTGC GCGGCGCCGG TGCGCACCCG CGATGGCGAG
ATCATCGGCA CCGTGCTGGT GTTCCAGAAC GTCACCAAGG CCCGGGCGAT GCAGCGCGAG
CTGAGCTATC ACGCCTCCCA CGATGCCCTC ACCGGGCTGT TCAACCGCAC CAAGTTCGAG
GAGGAGCTGC AACGCGCCCT GGCCAACGCC CAGGAGCGGG CGACCCAGCA TGCGCTGTGC
TTCATCGACC TCGACCGCTT CAAGGTGGTC AACGATTCCG CCGGGCACGC GGCGGGCGAC
ATGCTGCTGC GCGAGCTGAG CCGGATTCTC GCCGACCGTA CCCGCGCCTC CGACACCCTG
GCGCGGCTGG GCGGCGATGA GTTCGGCCTG CTGCTGTTCG ATTGCGACCT GGCGGAGGCG
GAGCAGGTGG CGAGCAAGCT CATCGAGCAG ATCTGCTCGG TGCGCTTCCC CTGGGAAGGG
CGGCTCTACG ACGTGGGCGC GAGCATCGGT ATCACCGCCC TTACCGCCAC CTCGCGCAGC
ACCAGCGAAC TGATGAGCCA GGCCGACGTG GCCTGCTACG CGGCCAAGCA TGCCGGGCGC
AACCGGGTTT CGGTGTACCA GTTCGGCCAT GAGGAAGTGG AGCGCCAGCA CCGCGACATA
CTCCTCGCCA GCGGGCTGCG CGAGGCCCTG GAGAACGACC GCTTCCAGTT GCAGGCGCAG
GAGATCGTCC CGGTCGGCCC CCGCCGCGAC GGCGACCGGC ACTACGAGCT GCTGCTGCGA
CTGTACGATC CGGATGGCCA GATGACTCCG CCGGGCGCCT TCATCCCGGC CGCCGAGCGC
TTCAACCTGA TGGCCAGCAT CGACCGCTGG GTGATCAACG AGGCGCTGAT CAACTTCGGC
GCGCGGATCG CCGCGGTGGA GGGCCTGAGC ATCGGCATCA ACCTGTCCGG CAACTCGCTC
AACGACCCGC TGTTCCTGCC TTACCTGCTG GATCGCATCG AACACTCGCC GCTGAGGCCG
GAGCGCCTGT ACTTCGAGCT GACCGAGACG GCGTTGATGA ACCAGTTGTC GGTGGCTTCG
CGGATCGTCG CCAAGCTGCG CGACCTCGGC TGCAAGGTGG CGTTGGACGA CTTCGGCTCC
GGCCTGAGTT CCTTCAATTA CCTGAAGAAT TTCGTCGTCG ACGTGATCAA GATCGACGGC
AGCTTCGTCC GCAACCTGGA CAAGAGCCCG GTGGACCAGG CCATCGTCGA CTCCATCAAC
CAGATCGCCC ACCGCCTGGG CGCGGTGACC GTGGCCGAGT TCGTCGAGAG CCGGGAAATC
CTCGATCACC TGGCGCGCCT CGGGGTGGAT TTCGCCCAGG GCTACGCGGT CGGTCGGCCG
CAGCCGTTCG CCACGGTGCT CGACCAACTG CGCAGCGGGC TTCGTCGCCA GGAGTTGGGC
TGA
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| Protein sequence | MFSGKTDDRG LWAGIQAGVL FFLAALACIY LSRQPATIAA IWLPNAILTA ALLRAPLRQW
PAILLCSAVA NLAANRLYGD SLWMSAAFLP ANLSEAIFAA MLLRINRVRE DFEFNLHSAV
RVLWAGALIP PLLGASVGAV LVSVFGMGRF PEMWARWYVG DAMGMLALLP LCMASNLAAW
RHALSGRAGV DNAMLLLVTL VISFVALTRL PYAFIYVLLP LLVAAASTSV FGTALIGCLN
TCFIAVLIAL GVFVPESSQQ RFGEPLLYLP MALTLIPAFL VSVIMERSRR EQHQVAIGEA
QFRGAMEFSA IGMALVSLEG RLFKVNEALC RMLGYSAERL GELSFQEITY VDDLELDLDL
VRDLLAGRIN SYQMEKRYLR QDGETFWARI SVSLVRDEEG VAQYFVTQVE DIDSRKRAEL
ERERLAERIK LATDAGQIGI WEWDLARNRL HWDFRMFDLY GIRSGPGETT VEQWKASLHA
EDHDRVLREL ERAVSGLQKF DCEFRIVRPN REVRHLRAIA TLTRDEDNRP VRMIGINSDI
TEIRTLAETL HEEKERLQVT LYSIGDAVLT TDAGGRVTFM NPVAEAMTGW TLQDAIGAPH
ELVFNVLDSD TGEALESPVR RCLQNTRVFY LEDGATLISR KGEQHDIQNC AAPVRTRDGE
IIGTVLVFQN VTKARAMQRE LSYHASHDAL TGLFNRTKFE EELQRALANA QERATQHALC
FIDLDRFKVV NDSAGHAAGD MLLRELSRIL ADRTRASDTL ARLGGDEFGL LLFDCDLAEA
EQVASKLIEQ ICSVRFPWEG RLYDVGASIG ITALTATSRS TSELMSQADV ACYAAKHAGR
NRVSVYQFGH EEVERQHRDI LLASGLREAL ENDRFQLQAQ EIVPVGPRRD GDRHYELLLR
LYDPDGQMTP PGAFIPAAER FNLMASIDRW VINEALINFG ARIAAVEGLS IGINLSGNSL
NDPLFLPYLL DRIEHSPLRP ERLYFELTET ALMNQLSVAS RIVAKLRDLG CKVALDDFGS
GLSSFNYLKN FVVDVIKIDG SFVRNLDKSP VDQAIVDSIN QIAHRLGAVT VAEFVESREI
LDHLARLGVD FAQGYAVGRP QPFATVLDQL RSGLRRQELG
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