| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_48830 |
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| Symbol | |
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| ID | 4380140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4339639 |
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| End bp | 4341039 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639326489 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_792054 |
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| Protein GI | 116049144 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00000000733273 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGCTTG TCGAGGAGCC GACGATTTCC GCGCGAAGCG GTGAACTAGC CTGGTTGGTG
GACTGCCTGG CGCCGATTTT CGACGGCCTG CGGCAACCGG TCACGGTGGT CGACCCCTCC
GGTCGCTTCG TCTACTACAA CCGTGCCAGC GGCCTGCTCG ATGGTCTCGA CCCGCAGCGG
GCGCTGGGCA TGCACCTGTT GCAGAGCGCT CCCTGGCTGG CGGCCGAGCA AAGCACGCTG
TTGCGTTGCC TGGCCGAAGG GCGGCCGTCG ATCGATACGC TGCAGGCCTA CGTGGGGGCC
GGCGGCGAGC TGTTGCAGTA TCGCCACCGG GCGATCCCGC TGCGCGGGCG CGACGGTTGC
CTGCTCGGCG CGATGGAGCT CGGCGAAGTC GTCGCCGAGA CCGAAGAGGC CGCAGGCCCG
GCGGATTGCC CGAACATCCT GAGCGTGGCG CCGAGCCTGC TGCGGCAGTT GCAGCGCCTG
GACGTCTTCG CGGCCACCGA CCTGCCGCTG CTGATCCATG GCGAGACCGG CACCGGCAAG
GAACTGTTCG CCCGTCGCGC CCATGCCCTG AGCCCGCGAC GCAGCGGTCC GATGATCAGC
CTGAACTGCG CAGCGATTCC CGAGACGCTG CTGGAAAGTA CCCTGTTCGG CACCACCCGC
GGCGCTTTCA CCGGCGCCGA GAACCGCAAG GGCATGTTCG CCCTGGCGCA GGGCGGCAGC
TTGTTCCTCG ACGAGATCAA TTCCATGCCG ATGGCCATGC AGAGCAAGCT GCTGCGGGTC
CTGCAGGACG GCAGCTACCT GCCTCTGGGC AGCCTGAGCC CGCAGCGGGC CGATGTACGC
CTGATCGCGG CGAGCAACCA GCCGCCGCGC CAGGCGATCG CCGAGGGACG CCTGCGCGAG
GACCTGTACT ACCGTCTGGA CGTGGGCAGC CTGTGCATCC CGCCGCTGCG CGAGCGCCCC
GGCGATGTGG AACTGCTGGC ACGGGCGTTC GTCCGTCGCG ATGCGCGCAG CCTCAACCCA
CGTGTCACCG CCCTTGGCGA ACGGGCGCTG GCGCAGTTGC TGGCCTGCGA CTGGCCGGGC
AACGTCCGGC AACTGGAAAA CGTGATCCGA CGCAGCCTGT TGCTGCACGG GGAGGGCGGC
GCACTGCTGG ATGAGGTGGC GTTCGCCGAC GACGGCGCCG AGGCCGTGGG CGGCGAGGCC
GCGCTCTCGA TGAACAGCGC GGCGGTCGGA GGCCTGCGCG AGGCGCTGGC GCAACAGGAG
CGCAACCTGA TAGAAGACGC CTTGCGCCAG GCGCGCGGCA ATCTCTCCCG GGCCGCCGCC
CGGTTGCGGA TTCCGCGCAC GACCCTGCTC GGGCGCATGC GCCGGCTCGG CTTGCCGGCT
TCCCTCGATC CGCCAGCCTG A
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| Protein sequence | MALVEEPTIS ARSGELAWLV DCLAPIFDGL RQPVTVVDPS GRFVYYNRAS GLLDGLDPQR
ALGMHLLQSA PWLAAEQSTL LRCLAEGRPS IDTLQAYVGA GGELLQYRHR AIPLRGRDGC
LLGAMELGEV VAETEEAAGP ADCPNILSVA PSLLRQLQRL DVFAATDLPL LIHGETGTGK
ELFARRAHAL SPRRSGPMIS LNCAAIPETL LESTLFGTTR GAFTGAENRK GMFALAQGGS
LFLDEINSMP MAMQSKLLRV LQDGSYLPLG SLSPQRADVR LIAASNQPPR QAIAEGRLRE
DLYYRLDVGS LCIPPLRERP GDVELLARAF VRRDARSLNP RVTALGERAL AQLLACDWPG
NVRQLENVIR RSLLLHGEGG ALLDEVAFAD DGAEAVGGEA ALSMNSAAVG GLREALAQQE
RNLIEDALRQ ARGNLSRAAA RLRIPRTTLL GRMRRLGLPA SLDPPA
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