Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_48340 |
Symbol | |
ID | 4385808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4299922 |
End bp | 4301961 |
Gene Length | 2040 bp |
Protein Length | 679 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639326449 |
Product | hypothetical protein |
Protein accession | YP_792014 |
Protein GI | 116049184 |
COG category | [S] Function unknown |
COG ID | [COG1289] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00973423 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.112211 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCGT CGGCGTCCGG CGGGCGCGAT TGGTACGCGG CGTTGCCGTT GCCCTGGCGG ACCGACAGCC TGGGCTACGT GCTGCGCAGC ATCGGCGCTG CCGCTCTGGC GCTCGGCCTG GGGCTCTACC TGCAACTGGA TTCGCCGTTT TCCGCGGCGT CCACTGTGCT GTTGCTGATC AATCCGGTGC AGGGAGCGGT GGTCGGCAAG GGCTGGTGGC GCGCCGTGGG TACCCTGGTC GGCACGCTCG CTGCCTTCGT CCTGACCGCG CTGTTCGCCC AGAAGATGCT GCTGTTCGTC GTCGCCCTGG GTTTCTGGCT GGGTCTCTGC GTCGGCGTCA TGAGCCTGGT CCGGCACTTC TACGCCACTG CCGCGGTGGT CGCCGGCTAC ACCGTGTGCC TGGCGCTGGG ACCGGCCATG GTCGAGCCCG AGGCGGCCTT CGAGCACATC GTCACCCGCG CCTCGGCGGT AATCGTCGGG GTCTGCTGCC TGAGCTTGGT GACCGTGCTC TTCAGCCGCA GGACCGTGTC CGGGCGGGTG CGCCAGCGTC TCGTCTCGCT CTGCGCGGCG ACGCTGGCGC TGGTCGCTGC GCGGCATGCC GGTGCGGCTG ACGGGGAACT GGAGCGCCGT CGCCGGACGC TGGCCGGCGA GGTCTACGCG GTAGACGACC TGCTGGGCGT CGGTCGCGCC GAGTCGCGGG CGCTGAGCGC TGCGCTCCCG GCGATCCGCG GTGGCCTGGC GGCGCTGTTT TCCACGCTGA TGGAGTTCCG CTTCGCCGGC GAGACGCATT GGGCCCGGCG CTTGGCGGAG CGTGGACTGG CGCTGCCGAT GGCCGACGAC CTGTGCCTGC TGGGCGGCCA ACTGGAGCGC GGCGAGCTCG ACTTCGCCGG CGCCGCGCGA CGGCTCGCGA GCTTGCGCGG TCGCCTGGCG GCGATTCGGC GCGGACTTCC GACAGACCAA GCGGATGCCT GTCGCGAAGG GCTGTTCATG GAGCGTCTCG ACGAGCAACT GGATGACCTG CAGGCCGCCC TGCGGGGGTT CGCCCGGCTC GACGGCCGGG CCCGCGCCGA CGTCCGCCCA GCGGCCTTCC ATCGACATTA CCGCGAGGCC TTGCGCAACG GCGCGCGAGC CTGGCTGGCG ATGCTGGTCG GCGGCGCCCT GTGGTTCCTC AGCGGGTGGG ACCAGGGGCC GACCCTGCTG GCGGTGCTCG GCCCCTACTG CACGCTGCTG GCAGCCTCGC CCTTTCCCGC CGAGGGCACG CGCAATTTCA TTCGCGGCAC GCTCTACGCG ATACCTGCCG CATTGCTCTG CAAATTCCTT CTGCTACCGC TGATCAACGG TTTTCCATTG CTGCTGCTGT GCCTCGCCTT CTTCTGGTCG TTCGGTATCC AGGCCACCAC AGTGCCCAGG CGGGCGTTGC AGGGAATCGC CTACCTGATC GCCTTCAACA CCCTGGTCGC CACCGGCAAT CTCGCCCGCT TCGATTTCGG CGACTTCGCC AACCAGTCCT GCGCCTGGGT GCTGGCGCTC TGCATCAGCC TGCTGGTCTA CCGCCTGCTG CCGAAGGACC TGGAACGGCA TTCGGCGTCG CTGCTCGACC ATCTGCGCCG CGAGACCCTA GCCTTGCTGC GTCGTCGCGC CGGTTTCGAC GCGCATGCCT GGCAGGCCCG CCAGCAGCAT CGCATCGCCC AGCTGGGCGC GTTGCATGGC ATGGAACATC CGCGCAGCGC GCTGGCCCTG CGCCTGGGCT TCGTATCCCT GCAACTCGGC CGCGAGTCGC GGCGCCTGTG GCGCGCCCTG GCCGGGCTCG ACCCGGCCGC CGCGGAGGCG CGGTGGATCG AGTGCGCACT GCGAGCCATC GCCGTCCGCC ATCGCGATCC GCCGCTCGCC GCGCGGCACG CACGCCGTGC CGGCGCTCGC CTGGCGGCCG CCGGCGAATG GCGCCTGGCC GCGATCCTCA CCGACCTCGC CTGGTTGCTC CGGGCCTATT CGCAAAGCGT CTCGTCCGAC GGGGCGCAGC ATGGAGAAAA GACCTCATGA
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Protein sequence | MAASASGGRD WYAALPLPWR TDSLGYVLRS IGAAALALGL GLYLQLDSPF SAASTVLLLI NPVQGAVVGK GWWRAVGTLV GTLAAFVLTA LFAQKMLLFV VALGFWLGLC VGVMSLVRHF YATAAVVAGY TVCLALGPAM VEPEAAFEHI VTRASAVIVG VCCLSLVTVL FSRRTVSGRV RQRLVSLCAA TLALVAARHA GAADGELERR RRTLAGEVYA VDDLLGVGRA ESRALSAALP AIRGGLAALF STLMEFRFAG ETHWARRLAE RGLALPMADD LCLLGGQLER GELDFAGAAR RLASLRGRLA AIRRGLPTDQ ADACREGLFM ERLDEQLDDL QAALRGFARL DGRARADVRP AAFHRHYREA LRNGARAWLA MLVGGALWFL SGWDQGPTLL AVLGPYCTLL AASPFPAEGT RNFIRGTLYA IPAALLCKFL LLPLINGFPL LLLCLAFFWS FGIQATTVPR RALQGIAYLI AFNTLVATGN LARFDFGDFA NQSCAWVLAL CISLLVYRLL PKDLERHSAS LLDHLRRETL ALLRRRAGFD AHAWQARQQH RIAQLGALHG MEHPRSALAL RLGFVSLQLG RESRRLWRAL AGLDPAAAEA RWIECALRAI AVRHRDPPLA ARHARRAGAR LAAAGEWRLA AILTDLAWLL RAYSQSVSSD GAQHGEKTS
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