Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_47930 |
Symbol | |
ID | 4385552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4266315 |
End bp | 4268057 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639326421 |
Product | hypothetical protein |
Protein accession | YP_791986 |
Protein GI | 116049211 |
COG category | [S] Function unknown |
COG ID | [COG1679] Uncharacterized conserved protein [COG1786] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.444415 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCACG CACACCTCAT CGTTCCCCGT ACCCTGGTCG CCGGCAGCGC GTCCGGCGAA CTGCTGTACG CACCGACCGG CCTGAGCTTC TGGGGCGGCG TCGACCCGCG CAGCGCGGAA GTGATCGACC GCCACCACCC GCTCAGCGGC CGCCATCTGC ACGGCAGGCT GCTGGCGATT CCCGGTGGGC GCGGCTCCTG CACCGGCAGC AGCGTACTGC TGGAACTGAT CCTCGGCGGA CGTGCGCCGG CGGCGATCCT CCTGCGCGAA CCGGACGAAA TCCTCGCCCT CGGCGCGATA GTCGCCGAGG AACTGTTCGG CCGCTCGCTA CCCATCGCCT GTCTCGGCGA GCGCTTCGAC GAACTCGCCG CCTATCCCTG GGCGCGCCTG GCCGACGGTC GCCTGGAACT CCACCGCGAT GCCCCGCCGC CGCTGGAGGC CCGGCCCGCC GAAGCGCTGG CGACCGATGC CGGCCCGCGA CTGGACGCCT TCGACCAGGC CCTGCTCGCC GGCGAACACG GCGAAGCCGC GCGCCTGGCG ATGCGCATCG TCCTGCGCAT GGCGGCGTTG CAGGGCGCGC AACGGCTGGT CGAGATCCAG CGCGCGCACA TCGACGCTTG CATCTACACC GGCCCGGCCG GCCTGCGCTT CGCCGAGACC CTGCGCGACC TCGGTGCCCG GGTGCGGGTA CCGACCACCC TCAACGCCAT CTCCGTGGAC CAGCGCCGCT GGCGCGAACA GGGCGTACCC GCCGCCCTCG GCGAGCCAGC CGCGGCCCTG GCCCAGGCCT ATCTCGACAT GGGCGCGCAG CCCAGCTTCA CCTGCGCGCC CTACCTGCTC GACGACAGCG CGCGGGCCGG CGAACAGATC GTCTGGGCCG AGTCCAACGC GGTGCTCTTC GCCAACAGCG TGCTCGGCGC ACGCACCAAC AAGTACGCCG ACTTCATGGA TATCTGCTGC GCCCTCACCG GTCGCGCGCC GCTGGCCGGC TGCCACCTCG ACGAGCAGCG CCAGGCGCGG GTACTGATCG AAGTGGAAGA CCTCGGCAGC GTCGACGATG CCTTCTACCC GACCCTCGGC TACCTCTGCG GCCTGCTCTG CGACGGACAG ATCCCGGCGA TCGACGGCCT GCGGCAGCGG CAGCCGGACC ACGACGCGCT CAAGGCCTTC GGCGCGGCGC TGGGCACCAG TTCCTCGGTG CCGATGTTCC ACGTCATCGG CGTCACCCCG GAAGCCCCTG ACCTGGCCAG CGCCTTCGGC GGCCGCGCGC CGCGGCGGAC CCTGCGGGTC GGACGCGAGC GCCTGCGCGA CGCCTGGCGC GAGCTGGACA GCGCCGGCGA GACGCGGATC GACCTGGTGG CGCTGGGCAA CCCGCACTTC TCCGCCAGCG AATTCGCCCA GCTCGCCGCG CTCTGCCACG GCCGCCGCAG ACACCCGGAG GTAGCGCTGG TGATCACCAG CAGCCGGCAG GTCGTCGCCC AGGCCGAAGC GGCCGGGCAC CTGGCGACGC TGCAGGCGTT CGGCGCGCGG CTGGTCACCG ACACCTGCTG GTGCATGCTC GACGAACCGC TGGTACCGCC GGGCGCGCGC ACCCTGATGA CCAACTCCGC CAAGTATGCC CACTACGCCC CCGGACTGGT CAGCCGCCAG GTGCGCTTCG CCGGCCTCGC CGGCTGCGTC GAGGCCGCCG TCGGCGGACG GCCCCCCGCC GGGCTGCCCG CCTGGCTGAG CGAGGACTGC TGA
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Protein sequence | MKHAHLIVPR TLVAGSASGE LLYAPTGLSF WGGVDPRSAE VIDRHHPLSG RHLHGRLLAI PGGRGSCTGS SVLLELILGG RAPAAILLRE PDEILALGAI VAEELFGRSL PIACLGERFD ELAAYPWARL ADGRLELHRD APPPLEARPA EALATDAGPR LDAFDQALLA GEHGEAARLA MRIVLRMAAL QGAQRLVEIQ RAHIDACIYT GPAGLRFAET LRDLGARVRV PTTLNAISVD QRRWREQGVP AALGEPAAAL AQAYLDMGAQ PSFTCAPYLL DDSARAGEQI VWAESNAVLF ANSVLGARTN KYADFMDICC ALTGRAPLAG CHLDEQRQAR VLIEVEDLGS VDDAFYPTLG YLCGLLCDGQ IPAIDGLRQR QPDHDALKAF GAALGTSSSV PMFHVIGVTP EAPDLASAFG GRAPRRTLRV GRERLRDAWR ELDSAGETRI DLVALGNPHF SASEFAQLAA LCHGRRRHPE VALVITSSRQ VVAQAEAAGH LATLQAFGAR LVTDTCWCML DEPLVPPGAR TLMTNSAKYA HYAPGLVSRQ VRFAGLAGCV EAAVGGRPPA GLPAWLSEDC
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