Gene PA14_47930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_47930 
Symbol 
ID4385552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4266315 
End bp4268057 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content73% 
IMG OID639326421 
Producthypothetical protein 
Protein accessionYP_791986 
Protein GI116049211 
COG category[S] Function unknown 
COG ID[COG1679] Uncharacterized conserved protein
[COG1786] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.444415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCACG CACACCTCAT CGTTCCCCGT ACCCTGGTCG CCGGCAGCGC GTCCGGCGAA 
CTGCTGTACG CACCGACCGG CCTGAGCTTC TGGGGCGGCG TCGACCCGCG CAGCGCGGAA
GTGATCGACC GCCACCACCC GCTCAGCGGC CGCCATCTGC ACGGCAGGCT GCTGGCGATT
CCCGGTGGGC GCGGCTCCTG CACCGGCAGC AGCGTACTGC TGGAACTGAT CCTCGGCGGA
CGTGCGCCGG CGGCGATCCT CCTGCGCGAA CCGGACGAAA TCCTCGCCCT CGGCGCGATA
GTCGCCGAGG AACTGTTCGG CCGCTCGCTA CCCATCGCCT GTCTCGGCGA GCGCTTCGAC
GAACTCGCCG CCTATCCCTG GGCGCGCCTG GCCGACGGTC GCCTGGAACT CCACCGCGAT
GCCCCGCCGC CGCTGGAGGC CCGGCCCGCC GAAGCGCTGG CGACCGATGC CGGCCCGCGA
CTGGACGCCT TCGACCAGGC CCTGCTCGCC GGCGAACACG GCGAAGCCGC GCGCCTGGCG
ATGCGCATCG TCCTGCGCAT GGCGGCGTTG CAGGGCGCGC AACGGCTGGT CGAGATCCAG
CGCGCGCACA TCGACGCTTG CATCTACACC GGCCCGGCCG GCCTGCGCTT CGCCGAGACC
CTGCGCGACC TCGGTGCCCG GGTGCGGGTA CCGACCACCC TCAACGCCAT CTCCGTGGAC
CAGCGCCGCT GGCGCGAACA GGGCGTACCC GCCGCCCTCG GCGAGCCAGC CGCGGCCCTG
GCCCAGGCCT ATCTCGACAT GGGCGCGCAG CCCAGCTTCA CCTGCGCGCC CTACCTGCTC
GACGACAGCG CGCGGGCCGG CGAACAGATC GTCTGGGCCG AGTCCAACGC GGTGCTCTTC
GCCAACAGCG TGCTCGGCGC ACGCACCAAC AAGTACGCCG ACTTCATGGA TATCTGCTGC
GCCCTCACCG GTCGCGCGCC GCTGGCCGGC TGCCACCTCG ACGAGCAGCG CCAGGCGCGG
GTACTGATCG AAGTGGAAGA CCTCGGCAGC GTCGACGATG CCTTCTACCC GACCCTCGGC
TACCTCTGCG GCCTGCTCTG CGACGGACAG ATCCCGGCGA TCGACGGCCT GCGGCAGCGG
CAGCCGGACC ACGACGCGCT CAAGGCCTTC GGCGCGGCGC TGGGCACCAG TTCCTCGGTG
CCGATGTTCC ACGTCATCGG CGTCACCCCG GAAGCCCCTG ACCTGGCCAG CGCCTTCGGC
GGCCGCGCGC CGCGGCGGAC CCTGCGGGTC GGACGCGAGC GCCTGCGCGA CGCCTGGCGC
GAGCTGGACA GCGCCGGCGA GACGCGGATC GACCTGGTGG CGCTGGGCAA CCCGCACTTC
TCCGCCAGCG AATTCGCCCA GCTCGCCGCG CTCTGCCACG GCCGCCGCAG ACACCCGGAG
GTAGCGCTGG TGATCACCAG CAGCCGGCAG GTCGTCGCCC AGGCCGAAGC GGCCGGGCAC
CTGGCGACGC TGCAGGCGTT CGGCGCGCGG CTGGTCACCG ACACCTGCTG GTGCATGCTC
GACGAACCGC TGGTACCGCC GGGCGCGCGC ACCCTGATGA CCAACTCCGC CAAGTATGCC
CACTACGCCC CCGGACTGGT CAGCCGCCAG GTGCGCTTCG CCGGCCTCGC CGGCTGCGTC
GAGGCCGCCG TCGGCGGACG GCCCCCCGCC GGGCTGCCCG CCTGGCTGAG CGAGGACTGC
TGA
 
Protein sequence
MKHAHLIVPR TLVAGSASGE LLYAPTGLSF WGGVDPRSAE VIDRHHPLSG RHLHGRLLAI 
PGGRGSCTGS SVLLELILGG RAPAAILLRE PDEILALGAI VAEELFGRSL PIACLGERFD
ELAAYPWARL ADGRLELHRD APPPLEARPA EALATDAGPR LDAFDQALLA GEHGEAARLA
MRIVLRMAAL QGAQRLVEIQ RAHIDACIYT GPAGLRFAET LRDLGARVRV PTTLNAISVD
QRRWREQGVP AALGEPAAAL AQAYLDMGAQ PSFTCAPYLL DDSARAGEQI VWAESNAVLF
ANSVLGARTN KYADFMDICC ALTGRAPLAG CHLDEQRQAR VLIEVEDLGS VDDAFYPTLG
YLCGLLCDGQ IPAIDGLRQR QPDHDALKAF GAALGTSSSV PMFHVIGVTP EAPDLASAFG
GRAPRRTLRV GRERLRDAWR ELDSAGETRI DLVALGNPHF SASEFAQLAA LCHGRRRHPE
VALVITSSRQ VVAQAEAAGH LATLQAFGAR LVTDTCWCML DEPLVPPGAR TLMTNSAKYA
HYAPGLVSRQ VRFAGLAGCV EAAVGGRPPA GLPAWLSEDC