Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_47820 |
Symbol | |
ID | 4384689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4255428 |
End bp | 4256096 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639326411 |
Product | putative transcriptional regulator |
Protein accession | YP_791976 |
Protein GI | 116049221 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00000218363 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAACG CCCCTAACCT GGGCATCGCC CCTTCGGCCT CCGAGATCAT CGCCAAGCAC CTGCGCGAAG CGATCATCGC CGGGCATTTC GCCGAGGACG AACCGATCCG CCAGGACGAC ATCGCGCAAC TCTTCAATGT CAGCAAGATT CCCGTCCGCG AGGCCCTCAA GCGCCTGGAA GCGGAAGGCC TGGTGCTGTT CCAGCGCAAC AAGGGCGCGG TGGTGACGCG TATTTCCGAA CCGGAACTGG CGCAGATGTT CGAAGTGCGG GTGCTGCTCG AGGCGCAGGC GATCCGCCTG GCGGTGCCGA ACATGGACGA GACCACCTTC GCCCGCGCCG AGGCGATCTG CGCCGACTTC GTCGGCGAAG ACAACGTCGG ACGCTGGGCC GAACTCAACT GGCAACTGCA CGCCTGCCTC TACGAACCGG CACAGCGGCC GTTCCTGGTC AACCTGATCC GCTCCATCCA CGACAAGCTG GAACGTTACC TGCGCATGCA GATGAGCCTG TCCGAAGGCA AGCAGCGCGC CGACCAGGAA CACCGCGAGA TCGTCGCCGC CTGTCGCGCC GGCGATGCTG AACAGGCCGC GGCACTGATC GAGGCACATA TCGTCGGGGT CTGCCGGACC CTCTACGAAC ACCTGCCGAA CCGCCCGGCC AGCACCTGA
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Protein sequence | MLNAPNLGIA PSASEIIAKH LREAIIAGHF AEDEPIRQDD IAQLFNVSKI PVREALKRLE AEGLVLFQRN KGAVVTRISE PELAQMFEVR VLLEAQAIRL AVPNMDETTF ARAEAICADF VGEDNVGRWA ELNWQLHACL YEPAQRPFLV NLIRSIHDKL ERYLRMQMSL SEGKQRADQE HREIVAACRA GDAEQAAALI EAHIVGVCRT LYEHLPNRPA ST
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