Gene PA14_47820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_47820 
Symbol 
ID4384689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4255428 
End bp4256096 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content65% 
IMG OID639326411 
Productputative transcriptional regulator 
Protein accessionYP_791976 
Protein GI116049221 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00000218363 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAACG CCCCTAACCT GGGCATCGCC CCTTCGGCCT CCGAGATCAT CGCCAAGCAC 
CTGCGCGAAG CGATCATCGC CGGGCATTTC GCCGAGGACG AACCGATCCG CCAGGACGAC
ATCGCGCAAC TCTTCAATGT CAGCAAGATT CCCGTCCGCG AGGCCCTCAA GCGCCTGGAA
GCGGAAGGCC TGGTGCTGTT CCAGCGCAAC AAGGGCGCGG TGGTGACGCG TATTTCCGAA
CCGGAACTGG CGCAGATGTT CGAAGTGCGG GTGCTGCTCG AGGCGCAGGC GATCCGCCTG
GCGGTGCCGA ACATGGACGA GACCACCTTC GCCCGCGCCG AGGCGATCTG CGCCGACTTC
GTCGGCGAAG ACAACGTCGG ACGCTGGGCC GAACTCAACT GGCAACTGCA CGCCTGCCTC
TACGAACCGG CACAGCGGCC GTTCCTGGTC AACCTGATCC GCTCCATCCA CGACAAGCTG
GAACGTTACC TGCGCATGCA GATGAGCCTG TCCGAAGGCA AGCAGCGCGC CGACCAGGAA
CACCGCGAGA TCGTCGCCGC CTGTCGCGCC GGCGATGCTG AACAGGCCGC GGCACTGATC
GAGGCACATA TCGTCGGGGT CTGCCGGACC CTCTACGAAC ACCTGCCGAA CCGCCCGGCC
AGCACCTGA
 
Protein sequence
MLNAPNLGIA PSASEIIAKH LREAIIAGHF AEDEPIRQDD IAQLFNVSKI PVREALKRLE 
AEGLVLFQRN KGAVVTRISE PELAQMFEVR VLLEAQAIRL AVPNMDETTF ARAEAICADF
VGEDNVGRWA ELNWQLHACL YEPAQRPFLV NLIRSIHDKL ERYLRMQMSL SEGKQRADQE
HREIVAACRA GDAEQAAALI EAHIVGVCRT LYEHLPNRPA ST